971d2c1a-51cc-49fd-882c-465970de8ed2 Mat Audrey amat@ifremer.fr pointOfContact 2025-12-14T16:50:57.920867Z ISO 19115-3 - SEXTANT ISO 19115-3 - SEXTANT 1.0 WGS 84 (EPSG:4326) EPSG 8.6 Temporal gill transcriptome of the deep-sea mussel Bathymodiolus azoricus in situ and in the laboratory Temporal gill transcriptome of the deep-sea mussel Bathymodiolus azoricus in situ and in the laboratory Transcriptome temporel de la branchie de la modiole Bathymodiolus azoricus in situ et au laboratoire 2017-07-26 creation 2019-10-24 publication FR-330-715-368-00032-IFR_BIOINFO_RYTHM_AND_BLUE DOI:10.12770/971d2c1a-51cc-49fd-882c-465970de8ed2 The project was designed to explore biological rhythms in the hydrothermal vent mussel Bathymodiolus azoricus. The experiment provides the first high-resolution temporal transcriptomes of an hydrothermal species, both in situ and in the laboratory. Ifremer - Laboratoire Environnement Profond et LEMAR Mat Audrey Audrey.Mat@ifremer.fr author Sarrazin Jozee IFREMER 02 98 22 43 29 02 98 22 47 57 Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané Brest France France France Jozee.Sarrazin@ifremer.fr author Markov Gabriel V. author Apremont Vincent IFREMER 02 29 00 85 68 Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané Brest France France France Vincent.Apremont@ifremer.fr author Dubreuil Christine IFREMER Christine.Dubreuil@ifremer.fr author Eché Camille author Fabioux Caroline UBO Caroline.Fabioux@univ-brest.fr author Klopp Christophe author Sarradin Pierre-Marie IFREMER 02 98 22 46 72 Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané Brest France France France Pierre.Marie.Sarradin@ifremer.fr author Tanguy Arnaud author Huvet Arnaud IFREMER 02 98 22 46 93 02 98 22 46 53 Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané Brest France France France Arnaud.Huvet@ifremer.fr author Matabos Marjolaine IFREMER 02 98 22 43 05 02 98 22 47 57 Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané Brest France France France Marjolaine.Matabos@ifremer.fr author IFREMER sismer@ifremer.fr publisher https://sextant.ifremer.fr/geonetwork/srv/api/records/971d2c1a-51cc-49fd-882c-465970de8ed2/attachments/BioinfoMarine.png Habitats and biotopes Habitats and biotopes Habitats et biotopes GEMET - INSPIRE themes, version 1.0 GEMET - INSPIRE themes, version 1.0 2018-07-27T14:39:48 publication 2018-07-27 publication geonetwork.thesaurus.external.theme.httpinspireeceuropaeutheme-theme /Biological Environment/Bioinformatics /Biological Environment/Bioinformatics /Milieu biologique/Bio-Informatique Thèmes Sextant Thèmes Sextant 2025-12-09 publication geonetwork.thesaurus.local.theme.sextant-theme Variables ODATIS Variables ODATIS 2023-10-13 publication geonetwork.thesaurus.local.theme.odatis_variables Bioinformatics Bioinformatics Bioinformatique ODATIS aggregation parameters and Essential Variable names ODATIS aggregation parameters and Essential Variable names 2025-07-29 publication geonetwork.thesaurus.external.theme.NVS.OD1 Analysis data Analysis data Données d'analyse Type de jeux de donnée ODATIS Type de jeux de donnée ODATIS 2025-12-09 publication geonetwork.thesaurus.local.theme.type_jeux_donnee Accès restreint jusqu'à la publication de l'article Accès restreint jusqu'à la publication de l'article Accès restreint jusqu'à la publication de l'article utf8 environment -180.00 180.00 -90.00 90.00 /home/ref-bioinfo-public/ifremer/lep/RhythmAndBlue /home/ref-bioinfo-public/ifremer/lep/RhythmAndBlue NETWORK:LINK https://data-dataref.ifremer.fr/bioinfo/ifremer/lep/RhythmAndBlue/ https://data-dataref.ifremer.fr/bioinfo/ifremer/lep/RhythmAndBlue/ WWW:DOWNLOAD Lien de téléchargement https://doi.org/10.12770/971d2c1a-51cc-49fd-882c-465970de8ed2 https://doi.org/10.12770/971d2c1a-51cc-49fd-882c-465970de8ed2 DOI DOI of the dataset DOI of the dataset DOI of the dataset DOI du jeu de donnée Environmental cycles strongly impact living organisms and have favored the selection of biological clocks, which temporally organize living systems from the molecular to the organism level. These clocks are innate, endogenous, have a genetic basis, and are entrained by external cues called zeitgebers (time-givers). They are also adaptive, as they confer organisms the ability to anticipate changes in their environments. Biological rhythms are ubiquitous across taxa, from cyanobacteria to vertebrates and plants. They are adaptive, as they confer organisms the ability to anticipate changes in their environments. In the darkness of these ecosystems, the deep oceans are not aperiodic zones and oceanic internal tides – internal waves with tidal periodicity – occur throughout all depths worldwide. In the Pacific and Atlantic Oceans, tidal and diurnal periodicities have been reported to influence vent species behavior and abundance at 2000 m depth. This work aims to investigate the temporal ecology and chronobiology of deep-sea ecosystems focusing on the mussel of genus Bathymodiolus, one of the dominant macroorganisms in chemosynthesis-based communities around hydrothermal vents and cold-water seeps in the deep sea. The project was designed to explore biological rhythms in the hydrothermal vent mussel Bathymodiolus azoricus. The experiment provides the first high-resolution temporal transcriptomes of an hydrothermal species, both in situ and in the laboratory.