d01bb4d8-67b2-4be6-84de-18aeb5b2a24a Mege Mickael IFREMER mickael.mege@ifremer.fr pointOfContact 2025-12-13T11:48:56.559585Z ISO 19115-3 - SEXTANT 1.0 WGS 84 (EPSG:4326) EPSG 8.6 DNA sequencing of Crassostrea gigas Pacific oyster spat experimentally infected with OsHV-1 virus 2023-01-03 creation 2024-01-29 publication FR-330-715-368-00032-IFR_BIOINFO_2022_WGS_OsHV1-infected-Cgigas_20230106_ASIM_MM DNA sequencing of Crassostrea gigas Pacific oyster spat experimentally infected with OsHV-1 virus from oyster basin of Marennes-Oleron IFREMER (RBE/IHPE and RBE/ASIM) IFREMER sismer@ifremer.fr publisher Mege Mickael IFREMER mickael.mege@ifremer.fr author Pelletier Camille IFREMER Station de La Tremblade - Avenue de Mus de Loup - Ronce les Bains - 17390 La Tremblade La Tremblade France Camille.Pelletier@ifremer.fr author Morga Benjamin IFREMER 05 46 76 26 49 Station de La Tremblade - Avenue de Mus de Loup - Ronce les Bains - 17390 La Tremblade La Tremblade France Benjamin.Morga@ifremer.fr author Vidal Dupiol Jeremie IFREMER 04 67 14 36 84 Université de Montpellier - Campus Triolet - 2 Place E. Bataillon - CC080 (IHPE) - 34095 Montpellier Cedex 5 Montpellier France Jeremie.Vidal.Dupiol@ifremer.fr author https://sextant.ifremer.fr/geonetwork/srv/api/records/d01bb4d8-67b2-4be6-84de-18aeb5b2a24a/attachments/BioinfoMarine.png Habitats and biotopes GEMET - INSPIRE themes, version 1.0 2018-07-27T14:39:48 publication 2018-07-27 publication geonetwork.thesaurus.external.theme.httpinspireeceuropaeutheme-theme /Biological Environment/Bioinformatics Thèmes Sextant 2025-12-09 publication geonetwork.thesaurus.local.theme.sextant-theme Bioinformatics ODATIS aggregation parameters and Essential Variable names 2025-07-29 publication geonetwork.thesaurus.external.theme.NVS.OD1 Analysis data Type de jeux de donnée ODATIS 2025-12-09 publication geonetwork.thesaurus.local.theme.type_jeux_donnee CC-BY-NC (Creative Commons - Attribution, No commercial usage) grid utf8 oceans -8.48 -0.48 46.40 50.40 /home/ref-bioinfo/ifremer/asim/2022_WGS_OsHV1-infected-Cgigas NETWORK:LINK C. gigas genitors were sampled in breeding or non-breeding areas from Brittany, Marennes oleron Bay, Arcachon bay and Thau lagoon. Heigt families of C. gigas spat were produced in La Tremblade hatchery. These spat were experimentally infected with OsHV-1 virus from oyster of Marennes-Oleron bay. Moribund oysters and contaminated seawaters between post-infection were sampled. The DNA was extracted (Magattract kit for oyster/QIAamp DNA Mini Kit for seawater) and transfert to the Integragen sequencing platform, all samples were sequenced using Illumina sequencing technology (NovaSeq 6000 PCR free).