• Catalogue PIGMA
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RNA-Seq data from sea bass tongue samples exposed to acidification

In European sea bass like in other animals, the tongue plays a fundamental role in the mechanics of food ingestion. It is composed from the surface in depth of mucosa, submucosa, musculature and fibro cartilaginous skeleton. The tunica mucosa exhibits a stratified epithelium interrupted by numerous teeth differently distributed that erupt more or less completely from the layers below. The European sea bass tongue is composed of canine-like teeth, surrounded by taste buds and numerous fungiform and conical papillae. The tongue beeing directly in contact with external environment, the success of the adaptation of fishes to different environments in the context of global change, depends oamong other on the modifications occurring on the tongue structures. The present study investigates the potential effect of ocean acidification on the lingual transcriptome.

Simple

Date (Creation)
2023-05-02
Date (Publication)
2024-07-29
Identifier
FR-330-715-368-00032-IFR_BIOINFO_GOUDA_20230503_PHYTNESS_DM
Credit
IFREMER-RBE-PHYTNESS
Publisher
  IFREMER
Author
  IFREMER - Mazurais David
Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané , Brest , France
02 98 22 44 87
02 98 22 43 66
Author
  IFREMER - Fleury Elodie
Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané , Brest , France
02 98 22 42 31
02 98 22 43 66
Author
  IFREMER - Auffret Pauline
Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané , Brest , France
02 98 22 48 08
GEMET - INSPIRE themes, version 1.0
  • Habitats and biotopes
Thèmes Sextant
  • /Biological Environment/Bioinformatics
ODATIS aggregation parameters and Essential Variable names
  • Bioinformatics
Use limitation
CC-BY (Creative Commons - Attribution)
Access constraints
License
Use constraints
License
Metadata language
English
Character set
utf8 UTF8
Topic category
  • Environment
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OnLine resource
/home/ref-bioinfo-public/ifremer/phytness/gouda ( NETWORK:LINK )
OnLine resource
Download link ( WWW:DOWNLOAD )
OnLine resource
Publication ENA ( WWW:LINK )
OnLine resource
Digital Object Identifier (DOI) ( DOI )
Hierarchy level
Dataset
Statement
This study aims to compare the transcriptome of sea bass tongues exposed to the ocean acidification predicted by 2100 versus control samples in order to assess physiological effects.
File identifier
60127fbf-b2d7-48c8-93dc-71394ec7d1de XML
Metadata language
English
Character set
UTF8
Hierarchy level
Dataset
Date stamp
2025-05-15T22:36:18.244949Z
Metadata standard name
ISO 19115-3 - SEXTANT
Metadata standard version
1.0
Point of contact
  IFREMER - Mazurais David
Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané , Brest , France
02 98 22 44 87
02 98 22 43 66
 
 

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Keywords

GEMET - INSPIRE themes, version 1.0
Habitats and biotopes
ODATIS aggregation parameters and Essential Variable names
Bioinformatics
Thèmes Sextant
/Biological Environment/Bioinformatics

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