Whole genome sequences of 160 fish

160 whole genomes sequences obtained from 160 individual fish samples representing about 100 different species present in Gulf of Lion, and bay of Biscay.

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Date (Creation)
2021-03-01
Date (Publication)
2022-01-05
Identifier
FR-330-715-368-00032-IFR_BIOINFO_SEQ_160_FISH_GOLF_LION_BISCAY
Identifier
DOI:10.12770/47a8e408-9612-4228-a655-e26d9e70745c
Credit
Project FORESEA
Publisher
  IFREMER
Author
  IFREMER/MARBEC-LEGPM - Lapegue Sylvie
Université de Montpellier - Campus Triolet - Place E. Bataillon - CC080 - 34095 Montpellier Cedex 5 , Montpellier , France
Author
  IFREMER/MARBEC-LEGPM - Cornette Florence
Station de Sète - Avenue Jean Monnet - CS 30171 - 34203 Sète Cedex , Sete , France
04 99 57 32 84
Author
  CNRS/ISEM - Gagnaire Pierre-Alexandre
Author
  IFREMER/MARBEC-LEGPM - Ernande Bruno
Université de Montpellier - Campus Triolet - 2 Place E. Bataillon - CC080 (IHPE) - 34095 Montpellier Cedex 5 , Montpellier , France
04 67 14 45 66
Author
  CNRS/MARBEC - Villeger Sebastien
GEMET - INSPIRE themes, version 1.0
  • Habitats and biotopes
Thèmes Sextant
  • /Biological Environment/Bioinformatics
Use limitation
CC-BY (Creative Commons - Attribution)
Access constraints
License
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Other constraints
Data available upon request to authors.
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Metadata language
English
Character set
utf8 UTF8
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Reference system identifier
EPSG / WGS 84 (EPSG:4326) / 8.6

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OnLine resource
/home/ref-bioinfo-extranet/ifremer/marbec/foresea/ ( NETWORK:LINK )
OnLine resource
Digital Object Identifier (DOI) ( DOI )
Hierarchy level
Dataset
Statement
A total of 160 fish samples obtained from several Ifremer fish surveys, or costal sampling were sequenced (2x150 paired-end, 20X) on a single Illumina NovaSaq6000 Flow Cell S4. The objectives are to estimate the intraspecific genetic diversity of those species and determine the main functional traits influencing this diversity.
File identifier
47a8e408-9612-4228-a655-e26d9e70745c XML
Metadata language
English
Character set
UTF8
Hierarchy level
Dataset
Date stamp
2025-05-15T22:13:38.860612Z
Metadata standard name
ISO 19115-3 - SEXTANT
Metadata standard version
1.0
Point of contact
  IFREMER - Lapegue Sylvie
Université de Montpellier - Campus Triolet - Place E. Bataillon - CC080 - 34095 Montpellier Cedex 5 , Montpellier , France
 
 

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Keywords

GEMET - INSPIRE themes, version 1.0
Habitats and biotopes
Thèmes Sextant
/Biological Environment/Bioinformatics

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