• Catalogue PIGMA
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Global Ocean Biogeochemistry NON ASSIMILATIVE Hindcast (PISCES)

'''Short description:'''

You can find here the biogeochemistry non assimilative hindcast simulation GLOBAL_REANALYSIS_BIO_001_018 at 1/4° over period 1998 - 2016. Outputs are delivered as monthly mean files with Netcdf format (CF/COARDS 1.5 convention) on the native tripolar grid (ORCA025) at ¼° resolution with 75 vertical levels. This simulation is based on the PISCES biogeochemical model. It is forced offline at a daily frequency by the equivalent of the GLOBAL-REANALYSIS-PHYS-001-009 physics product but without data assimilation.

'''Detailed description: '''

There are 8 different datasets:

* dataset-global-nahindcast-bio-001-018-no3 containing : nitrate concentration

* dataset-global-nahindcast-bio-001-018-po4 containing : phosphate concentration

* dataset-global-nahindcast-bio-001-018-si containing : silicate concentration

* dataset-global-nahindcast-bio-001-018-o2 containing : dissolved oxygen concentration

* dataset-global-nahindcast-bio-001-018-fe containing : iron concentration

* dataset-global-nahindcast-bio-001-018-chl containing : chlorophyll concentration

* dataset-global-nahindcast-bio-001-018-phyc containing : carbon phytoplankton biomass

* dataset-global-nahindcast-bio-001-018-pp containing : primary production

The horizontal grid is the standard ORCA025 tri-polar grid (1440 x 1021 grid points). The three poles are located over Antarctic, Central Asia and North Canada. The ¼ degree resolution corresponds to the equator. The vertical grid has 75 levels, with a resolution of 1 meter near the surface and 200 meters in the deep ocean.Biogeochemical and physical simulations start at rest (cold start) in December 1991. The spin-up period consists of 5 years of interannual simulation between 1992 and 1997. The simulation period covers the ocean color era (1998 – 2016).The biogeochemical model used is PISCES (Aumont, in prep). It is a model of intermediate complexity designed for global ocean applications (Aumont and Bopp, 2006) and is part of NEMO modeling platform. It has 24 prognostic variables and simulates biogeochemical cycles of oxygen, carbon and the main nutrients controlling phytoplankton growth (nitrate, ammonium, phosphate, silicic acid and iron). The model distinguishes four plankton functional types based on size: two phytoplankton groups <nowiki>(small = nanophytoplankton and large = diatoms)</nowiki> and two zooplankton groups <nowiki>(small = microzooplankton and large = mesozooplankton).</nowiki>Prognostic variables of phytoplankton are total biomass in C, Fe, Si (for diatoms) and chlorophyll and hence the Fe/C, Si/C, Chl/C ratios are variable. For zooplankton, all these ratios are constant and total biomass in C is the only prognostic variable. The bacterial pool is not modeled explicitly. PISCES distinguishes three non-living pools for organic carbon: small particulate organic carbon, big particulate organic carbon and semi-labile dissolved organic carbon. While the C/N/P composition of dissolved and particulate matter is tied to Redfield stoichiometry, the iron, silicon and carbonate contents of the particles are computed prognostically. Next to the three organic detrital pools, carbonate and biogenic siliceous particles are modeled. Besides, the model simulates dissolved inorganic carbon and total alkalinity. In PISCES, phosphate and nitrate + ammonium are linked by constant Redfield ratio <nowiki>(C/N/P = 122/16/1)</nowiki>, but cycles of phosphorus and nitrogen are decoupled by nitrogen fixation and denitrification. Biogeochemical model PISCES (NEMO3.5) is forced offline by daily fields of the physical model NEMO (OPA module in the NEMO platform) without any assimilation of physical data. The main features of this dynamical ocean are:

* NEMO 3.1

* Atmospheric forcings from 3-hourly ERA-Interim reanalysis products, CORE bulk formulation

* Vertical diffusivity coefficient is computed by solving the TKE equation

* Tidal mixing is parameterized according to the works of Bessières et al. (2008) and Koch-Larrouy et al, (2006).

* Sea-Ice model: LIM2 with the Elastic-Viscous-Plastic rheology

* Initial conditions: Levitus 98 climatology for temperature and salinity, patched with PHC2.1 for the Arctic regions, and Medatlas for the Mediterranean Sea.

A special treatment is done on vertical diffusivity coefficient (Kz): the daily mean is done on Log10(Kz) after a filtering of enhanced convection (Kz increased artificially to 10 m2.s-1 when the water column is unstable). The purpose of this Log10 is to average the orders of magnitudes and to give more weight to small values of vertical diffusivity.

The atmospheric forcing fields are daily averages from ERA-Interim reanalysis product (CORE bulk formulation). Boundary fluxes account for nutrient supply from three different sources: Atmospheric deposition (Aumont et al., 2008), rivers for nutrients, dissolved inorganic carbon and alkalinity (Ludwig et al., 1996; Mayorga et al., 2010) and inputs of Fe from marine sediments. Nutrient and freshwater inflows by rivers are colocalized. River and dust inputs are balanced with sediment trapping of NO3, Si and Carbon. An annual and global value of atmospheric carbon dioxide is imposed at sea surface.

Simple

Alternate title
GLOBAL_REANALYSIS_BIO_001_018
Date (Creation)
2014-06-18
Edition
2.1
Edition date
2014-06-18
Identifier
69baaf65-fcaa-4f8a-a364-b18a216aaad0
Credit
E.U. Copernicus Marine Service Information
Custodian
  GLO-MERCATOR-TOULOUSE-FR - Yann Drillet
Point of contact
  GLO-MERCATOR-TOULOUSE-FR - GLO Service Desk
Originator
  GLO-MERCATOR-TOULOUSE-FR - Lucas Nouel
Resource provider
  GLO-MERCATOR-TOULOUSE-FR - Lucas Nouel
Distributor
  GLO-RAN-MERCATOR-TOULOUSE-FR - Service Desk CMEMS
Maintenance and update frequency
Annually
Other
P0M0D0H/P0M0D0H
Maintenance note
updated annually
GEMET - INSPIRE themes, version 1.0
  • Oceanographic geographical features
Discipline
  • numerical-model
Climate and Forecast Standard Names
  • mole_concentration_of_phosphate_in_sea_water
  • net_primary_production_of_biomass_expressed_as_carbon_per_unit_volume_in_sea_water
  • mole_concentration_of_phytoplankton_expressed_as_carbon_in_sea_water
  • mole_concentration_of_dissolved_molecular_oxygen_in_sea_water
  • mole_concentration_of_nitrate_in_sea_water
  • mole_concentration_of_dissolved_iron_in_sea_water
  • mole_concentration_of_silicate_in_sea_water
  • mass_concentration_of_chlorophyll_a_in_sea_water
  • model_level_number_at_sea_floor
Temporal scale
  • multi-year
  • invariant*
Area of benefit
  • marine-safety
  • marine-resources
  • weather-climate-and-seasonal-forecasting
  • coastal-marine-environment
Reference Geographical Areas
  • global-ocean
Processing level
  • Level 4
Model assimilation
  • None
Use limitation
See Copernicus Marine Environment Monitoring Service Data commitments and licence at: http://marine.copernicus.eu/web/27-service-commitments-and-licence.php
Access constraints
Other restrictions
Use constraints
License
Other constraints
No limitations on public access
Aggregate Datasetindentifier
d1dc2263-bd4a-478e-b8a6-1cd1d4be4631
Association Type
Cross reference
Initiative Type
document
Aggregate Datasetindentifier
370ce06a-229a-4faf-8891-71e5e5b3d820
Association Type
Cross reference
Initiative Type
document
Metadata language
eng
Topic category
  • Oceans
Description
bounding box
N
S
E
W
thumbnail


Begin date
1998-01-15
End date
2016-12-16

Vertical extent

Minimum value
-5500.0
Maximum value
0.0
Vertical CRS
  • urn:ogc:def:crs:EPSG:5714
Supplemental Information
display priority: 01009
Reference system identifier
EPSG / MYO Arakawa-C ORCA025 native grid
Number of dimensions
2
Dimension name
Row
Resolution
0.25  degree
Dimension name
Column
Resolution
0.25  degree
Cell geometry
Area
Transformation parameter availability
No

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-chl ( MYO:MOTU-SUB )

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-chl ( WWW:FTP )

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-fe ( MYO:MOTU-SUB )

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-fe ( WWW:FTP )

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-no3 ( MYO:MOTU-SUB )

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-no3 ( WWW:FTP )

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-o2 ( MYO:MOTU-SUB )

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-o2 ( WWW:FTP )

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-phyc ( MYO:MOTU-SUB )

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-phyc ( WWW:FTP )

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-po4 ( MYO:MOTU-SUB )

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-po4 ( WWW:FTP )

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-pp ( MYO:MOTU-SUB )

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-pp ( WWW:FTP )

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-si ( MYO:MOTU-SUB )

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-si ( WWW:FTP )

Distributor

OnLine resource
global-reanalysis-bio-001-018-statics ( WWW:FTP )

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-chl ( OGC:WMS:getCapabilities )
OnLine resource
CHL ( OGC:WMS )

mass_concentration_of_chlorophyll_in_sea_water

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-fe ( OGC:WMS:getCapabilities )
OnLine resource
Fe ( OGC:WMS )

mole_concentration_of_dissolved_iron_in_sea_water

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-no3 ( OGC:WMS:getCapabilities )
OnLine resource
NO3 ( OGC:WMS )

mole_concentration_of_nitrate_in_sea_water

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-o2 ( OGC:WMS:getCapabilities )
OnLine resource
O2 ( OGC:WMS )

mole_concentration_of_dissolved_molecular_oxygen_in_sea_water

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-phyc ( OGC:WMS:getCapabilities )
OnLine resource
PHYC ( OGC:WMS )

mole_concentration_of_phytoplankton_expressed_as_carbon_in_sea_water

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-po4 ( OGC:WMS:getCapabilities )
OnLine resource
PO4 ( OGC:WMS )

mole_concentration_of_phosphate_in_sea_water

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-pp ( OGC:WMS:getCapabilities )
OnLine resource
PP ( OGC:WMS )

net_primary_production_of_biomass_expressed_as_carbon_per_unit_volume_in_sea_water

Distributor

OnLine resource
dataset-global-nahindcast-bio-001-018-V5-si ( OGC:WMS:getCapabilities )
OnLine resource
Si ( OGC:WMS )

mole_concentration_of_silicate_in_sea_water

Hierarchy level
Series

Conformance result

Date (Publication)
2010-12-08
Explanation
See the referenced specification
Statement
The myOcean products depends on other products for production or validation. The detailed list of dependencies is given in ISO19115's aggregationInfo (ISO19139 Xpath = "gmd:MD_Metadata/gmd:identificationInfo/gmd:aggregationInfo[./gmd:MD_AggregateInformation/gmd:initiativeType/gmd:DS_InitiativeTypeCode/@codeListValue='upstream-validation' or 'upstream-production']")
Attribute description
observation
Content type
Physical measurement
Descriptor
temporal resolution: monthly mean
Descriptor
vertical level number: 75
Included with dataset
No
Feature types
Grid
File identifier
69baaf65-fcaa-4f8a-a364-b18a216aaad0 XML
Metadata language
English
Character set
UTF8
Hierarchy level
Series
Hierarchy level name
Copernicus Marine Service product specification
Date stamp
2020-06-04T00:25:27
Metadata standard name
ISO 19139, MyOcean profile
Metadata standard version
0.2
Point of contact
  CMEMS
http://marine.copernicus.eu/
 
 

Overviews

overview
GLOBAL_REANALYSIS_BIO_001_018

Spatial extent

N
S
E
W
thumbnail


Keywords

GEMET - INSPIRE themes, version 1.0
Oceanographic geographical features
Model assimilation
None

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Associated resources

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