• Catalogue PIGMA
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Global Look-Up Table of Physiological Ratios for the Real-Time Adjustment of Chlorophyll-a Fluorescence within the OneArgo Framework

This dataset provides a global Look-Up Table (LUT) of physiological ratios for the real-time adjustment of chlorophyll-a fluorescence measured by biogeochemical Argo (BGC-Argo) profiling floats. The physiological ratios aim to account for the global variability in the relationship between fluorescence and chlorophyll-a concentration, as influenced by phytoplankton physiology.

The LUT was developed using two different gap-filled observational Argo-based products (SOCA machine learning-based methodology ; Sauzède et al., 2016; Sauzède et al., 2024). The first product provides gap-filled chlorophyll-a data derived from fluorescence corrected for dark signal and non-photochemical quenching (NPQ) following Schmechtig et al. (2023), while the second product provides chlorophyll-a concentrations derived from light attenuation. The latter is based on the downward irradiance at 490 nm (ED490) derived from the SOCA-light method (Renosh et al., 2023). From this, the diffuse attenuation coefficient (KD490) is computed, which is subsequently used to estimate the chlorophyll-a concentration through the bio-optical relationships described by Morel et al. (2007).

These two products, based on fluorescence and radiometry, enable the derivation of spatially varying correction factors, or physiological ratios. These ratios provide a validated grounded framework for adjusting real-time fluorescence observations from OneArgo floats into chlorophyll-a concentrations.

The LUT is distributed in NetCDF format and is provided on a regular 1°×1° latitude–longitude grid covering the global ocean. Each grid cell contains the temporal mean, averaged over the water column (from the surface to 1.5 times the euphotic depth), of the physiological ratio. The file also includes metadata describing variable definitions, units, and other relevant information.

Variables included:

- physiological_ratio — fluorescence-to-radiometry-based chlorophyll correction factor (dimensionless)

- lat, lon — spatial coordinates (degrees north/east)

- Global attributes — dataset description, reference citation, and contact information

Simple

Date (Publication)
2025-10-21
Date (Revision)
2025-10-21
Other citation details
Sauzède Raphaëlle, Schmechtig Catherine, Renosh Pannimpullath Remanan, Uitz Julia, Claustre Hervé (2025). Global Look-Up Table of Physiological Ratios for the Real-Time Adjustment of Chlorophyll-a Fluorescence within the OneArgo Framework. SEANOE. https://doi.org/10.17882/105732
Credit
<p>The Look-Up Table (LUT) was generated using E.U. Copernicus Marine Service Products, which are derived from OneArgo data collected and made freely available by the International Argo Program and its contributing national programs (<a href="https://argo.ucsd.edu/">https://argo.ucsd.edu</a>, <a href="https://www.ocean-ops.org/">https://www.ocean-ops.org</a>). The Argo Program is a component of the Global Ocean Observing System (GOOS).</p>
Author
  Sorbonne Université, CNRS, FR 3761, Institut de la Mer de Villefranche (IMEV), Villefranche sur Mer, France - Sauzède Raphaëlle
Author
  Sorbonne Université, CNRS, UAR 3455, OSU Ecce-Terra, Paris Cedex 5, France - Schmechtig Catherine
Author
  Sorbonne Université, CNRS, UMR 7093, Laboratoire d’Océanographie de Villefranche (LOV), Villefranche sur Mer, France - Renosh Pannimpullath Remanan
Author
  Sorbonne Université, CNRS, UMR 7093, Laboratoire d’Océanographie de Villefranche (LOV), Villefranche sur Mer, France - Uitz Julia
Author
  Sorbonne Université, CNRS, UMR 7093, Laboratoire d’Océanographie de Villefranche (LOV), Villefranche sur Mer, France - Claustre Hervé
Publisher
  SEANOE
Theme
  • Physical oceanography
project
  • HorizonEurope Euro-Argo ONE (Agreement: 101188133)
SeaDataNet Parameter Disciplines
  • Physical oceanography
Use limitation
CC-BY (Creative Commons - Attribution)
Use constraints
Other restrictions
Other constraints
<p>The LUT is intended for the real-time adjustment of chlorophyll-a fluorescence measurements from profiling floats within the OneArgo framework. For each float observation, the appropriate physiological ratio can be extracted according to its geographic location and applied to correct fluorescence-derived chlorophyll-a concentrations, after the correction for dark signal and non-photochemical quenching (NPQ) has been performed (<a href="https://doi.org/10.13155/35385">Schmechtig et al., 2023</a>).</p>
Date (Publication)
2023
Publisher
  MDPI AG
Author
  Renosh Pannimpullath Remanan
Author
  Zhang Jie
Author
  Sauzède Raphaëlle
Author
  Claustre Hervé
Unique resource identifier
10.3390/rs15245663
Association Type
Cross reference
Initiative Type
Study
Date (Publication)
2016
Publisher
  American Geophysical Union (AGU)
Author
  Sauzède R.
Author
  Claustre H.
Author
  Uitz J.
Author
  Jamet C.
Author
  Dall'Olmo G.
Author
  D'Ortenzio F.
Author
  Gentili B.
Author
  Poteau A.
Author
  Schmechtig C.
Unique resource identifier
10.1002/2015jc011408
Association Type
Cross reference
Initiative Type
Study
Date (Publication)
Unique resource identifier
10.1016/j.rse.2007.03.012
Association Type
Cross reference
Initiative Type
Study
Date (Publication)
Unique resource identifier
10.13155/35385
Association Type
Cross reference
Initiative Type
Study
Date (Publication)
2020
Publisher
  Mercator Ocean International
Author
  European Union-Copernicus Marine Service
Unique resource identifier
10.48670/moi-00046
Association Type
Cross reference
Initiative Type
dataset
Metadata language
English
Topic category
  • Oceans
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W
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Distribution format
  • NC, NETCDF ( )

OnLine resource
Quality controlled data ( WWW:DOWNLOAD-1.0-link--download )

fluo_to_chl_physiological_ratio_LUT [RESTRICTED] - 510 KB

OnLine resource
DOI of the product ( WWW:LINK-1.0-http--metadata-URL )
OnLine resource
Seanoe ( rel-canonical )
Hierarchy level
Dataset
File identifier
seanoe:105732 XML
Metadata language
English
Character set
UTF8
Hierarchy level
Dataset
Date stamp
2025-10-21
Metadata standard name
ISO 19115:2003/19139
Metadata standard version
1.0
Point of contact
 
 
 

Overviews

overview
Mean global distribution of the physiological ratio for the real-time adjustment of chlorophyll-a fluorescence in OneArgo

Spatial extent

N
S
E
W
thumbnail


Keywords

Physical oceanography

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