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Nutrient dataset from the BioSWOT-Med cruise

The BioSWOT-Med campaign (Doglioli et al., 2023) was conducted aboard R/V L’Atalante from April 20 to May 15, 2023 in the Northwestern Mediterranean Sea, in the region of the North Balearic Front (NBF) to study interactions between fine-scale oceanic circulation and biogeochemical processes. 

Three water masses were sampled across the NBF, northern ('A'), southern ('B'), and frontal ('F'). Each Lagrangian station consisted of a 24-hour sampling period following the displacement of a water parcel (Doglioli et al., 2024). Vertical profiles down to 500 m were collected every 6 hours at 06:00 ('T1'), 12:00 ('T2'), 18:00 ('T3'), and 00:00 ('T4') UTC, for a total of 28 Lagrangian stations: first between April~24-28 (A1, F1, B1), and again between May~4-7 (B2, F2, A2), with a final station in southern waters (B3) on May~12-13. B2 and B3 stations were located inside an anticyclonic eddy.

Hydrological profiles were obtained using a Sea-Bird CTD, with data averaged to a 1~m vertical resolution, they include potential temperature (°C), practical salinity, fluorescence-derived chlorophyll-a (µg/L) and oxygen (µmol/kg). 

Samples for nitrate + nitrite and phosphate (µM) were collected from Niskin bottles and analyzed onboard within 2-12~hours using a segmented flow analyzer (AAIII HR Seal Analytical) following (Aminot et al., 2007). Quantification limits (QL) were 0.05 µM for nitrate and 0.02 µM for phosphate. Phosphate concentrations at a nanomolar level analyses were performed in the laboratory using a high-sensitivity method combining a 1 m Liquid Waveguide Capillary Cell (LWCC) and an auto-analyzer (Zhang et al. 2002), achieving a detection limit of 0.002µM. 

A BGC-Argo float (WMO: 1902605 - Provor CTS4 SUNA) equipped with a CTD and SUNA nitrate sensor was deployed near station B2 and sampled the anticyclonic eddy. To better resolve the photic and nutricline layers, the standard sampling cycle was modified to a 6-hour frequency, reaching depths of 300-400~m. The BGC-Argo float nitrate dataset spans May~2-16 and includes 55~profiles, with a 0.5 µM limit of quantification. It passed through a nitrate calibration procedure against 8 ship-made  profiles at B2 and B3.

Data export in NetCDF format

- Dataset at the 7 Lagrangian stations (28 vertical profiles for each variable, 4 at each station): 

‘BioSWOT-Med_LS_Date_Time.nc’ (with day, time, longitude and latitude); 

‘BioSWOT-Med_LS_Nutrients.nc’ (with nitrate, phosphate and phosphate at nanomolar level concentrations and depths); 

'BioSWOT-Med_LS_CTD.nc' (with temperature in situ, practical salinity, chlorophyll-a and oxygen concentrations, photosynthetically active radiations and depth).

- Dataset of the BGC-Argo float including 55 vertical profiles recorded between May 2 and 16: 

'BioSWOT-Med_BGC-Argo' (with day and time, longitude, latitude; nitrate concentrations with associated depth; temperature in situ and practical salinity associated depth; chlorophyll-a concentrations with associated predepthssure; and oxygen concentrations with associated depth).

Contact list 

Aude Joël (aude.joel@mio.osupytheas.fr ), Sandra Nunige (sandra.nunige@mio.osupytheas.fr, for ship-made nutrient dataset), Riccardo Martellucci (rmartellucci@ogs.it, for the BGC-Argo float dataset) and Andrea Doglioli (andrea.doglioli@mio.osupytheas.fr, for the BioSWOT-Med cruise).

References

Aminot, A., & Kérouel, R. 2007. Dosage automatique des nutriments dans les eaux marines: méthodes en flux continu. Méthodes d’analyse en milieu marin. Ifremer.

Doglioli, A.M., & Gregori, G. 2023. BioSWOT-Med cruise, RV L’Atalante. doi:10.17600/18002392.

Doglioli, A., Grégori, G., D’Ovidio, F., Bosse, P. E., A., Carlotti, F., Lescot, M.,. . . Waggonet, E. (2024). Bioswot med. biological applicati.ons of the satellite surface water and ocean topography in the mediterranean. ref. rapport de campagne. université aix-marseille. (doi:10.13155/100060)

Zhang, J.Z., & Chi, J. 2002. Automated analysis of nanomolar concentrations of phosphate in natural waters with liquid waveguide. Environ Sci Technol., 1;36(5), 1048–53. doi: 10.1021/es011094v.

 

Simple

Date (Publication)
2025-11
Date (Revision)
2025-12-19
Other citation details
Joël Aude, Andrea Doglioli, Anthony Bosse, Sandra Nunige, Léa Buniak, Riccardo Martellucci, Elena Mauri, Milena Menna, Massimo Pacciaroni, Elvira Pulido-Villena (2025). Nutrient dataset from the BioSWOT-Med cruise. SEANOE. https://doi.org/10.17882/109892
Credit
<p>The authors thank the TOSCA program of the CNES (French Spatial Agency) which funds the BIOSWOT-AdAC project and the ANR – FRANCE (French National Research Agency) for its financial support to the BIOSWOT ANR-23-CE01-0027 project. The FOF (French Oceanographic Fleet) and, in particular, the captain Gilles Ferrand and the crew of the R/V L’Atalante are acknowledged for their precious support during the BioSWOT-Med cruise.</p>
Author
  Aix Marseille University, Toulon University, CNRS, IRD, Mediterranean Institute of Oceanography MIO UM110, Marseille, France. - Joël Aude
Author
  Aix Marseille University, Toulon University, CNRS, IRD, Mediterranean Institute of Oceanography MIO UM110, Marseille, France. - Andrea Doglioli
Author
  Aix Marseille University, Toulon University, CNRS, IRD, Mediterranean Institute of Oceanography MIO UM110, Marseille, France. - Anthony Bosse
Author
  Aix Marseille University, Toulon University, CNRS, IRD, Mediterranean Institute of Oceanography MIO UM110, Marseille, France. - Sandra Nunige
Author
  Aix Marseille University, Toulon University, CNRS, IRD, Mediterranean Institute of Oceanography MIO UM110, Marseille, France. - Léa Buniak
Author
  National Institute of Oceanography and Applied Geophysics – OGS, Sgonico (TS) - Riccardo Martellucci
Author
  National Institute of Oceanography and Applied Geophysics – OGS, Sgonico (TS) - Elena Mauri
Author
  National Institute of Oceanography and Applied Geophysics – OGS, Sgonico (TS) - Milena Menna
Author
  National Institute of Oceanography and Applied Geophysics – OGS, Sgonico (TS) - Massimo Pacciaroni
Author
  Elvira Pulido-Villena
Publisher
  SEANOE
Theme
  • Oligotrophic oceans
  • nutrients
  • nutricline
  • fine-scale circulation
  • ocean dynamics
  • SWOT satellite
  • biogeochemical processes
  • Mediterranean Sea
  • North Balearic Front
  • Chemical oceanography
  • Physical oceanography
ODATIS aggregation parameters and Essential Variable names
  • Nutrients
SeaDataNet Parameter Disciplines
  • Chemical oceanography
  • Physical oceanography
Type de jeux de donnée ODATIS
  • /Observational data/in-situ
Use limitation
CC-BY-SA (Creative Commons - Attribution, Sharing under the same conditions)
Use constraints
Other restrictions
Date (Publication)
Unique resource identifier
10.13155/100060
Association Type
Cross reference
Initiative Type
Study
Unique resource identifier
10.17600/18002392
Association Type
Cross reference
Initiative Type
Platform
Metadata language
English
Topic category
  • Oceans
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W
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Begin date
2023-04-24
End date
2023-05-16
Distribution format
  • GRD (GMT NETCDF) ( )

OnLine resource
Processed data ( WWW:DOWNLOAD-1.0-link--download )

BioSWOT-Med_LS_CTD - 670 KB

OnLine resource
Processed data ( WWW:DOWNLOAD-1.0-link--download )

BioSWOT-Med_BGC-Argo - 221 MB

OnLine resource
Processed data ( WWW:DOWNLOAD-1.0-link--download )

BioSWOT-Med_LS_Nutrients - 31 KB

OnLine resource
Processed data ( WWW:DOWNLOAD-1.0-link--download )

BioSWOT-Med_LS_Date_Time - 10 KB

OnLine resource
DOI of the product ( WWW:LINK-1.0-http--metadata-URL )
OnLine resource
Seanoe ( rel-canonical )
Hierarchy level
Dataset
File identifier
seanoe:109892 XML
Metadata language
English
Character set
UTF8
Hierarchy level
Dataset
Date stamp
2025-12-19
Metadata standard name
ISO 19115:2003/19139
Metadata standard version
1.0
Point of contact
 
 
 

Overviews

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Spatial extent

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Keywords

Chemical oceanography Mediterranean Sea North Balearic Front Oligotrophic oceans Physical oceanography SWOT satellite biogeochemical processes fine-scale circulation nutricline nutrients ocean dynamics
ODATIS aggregation parameters and Essential Variable names
Nutrients
Type de jeux de donnée ODATIS
/Observational data/in-situ

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