• Catalogue PIGMA
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Temporal gill transcriptome of the deep-sea mussel Bathymodiolus azoricus in situ and in the laboratory

The project was designed to explore biological rhythms in the hydrothermal vent mussel Bathymodiolus azoricus. The experiment provides the first high-resolution temporal transcriptomes of an hydrothermal species, both in situ and in the laboratory.

Simple

Date (Creation)
2017-07-26
Date (Publication)
2019-10-24
Identifier
FR-330-715-368-00032-IFR_BIOINFO_RYTHM_AND_BLUE
Identifier
DOI:10.12770/971d2c1a-51cc-49fd-882c-465970de8ed2
Credit
Ifremer - Laboratoire Environnement Profond et LEMAR
Author
  Mat Audrey
Author
  IFREMER - Sarrazin Jozee
Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané , Brest , France
02 98 22 43 29
02 98 22 47 57
Author
  Markov Gabriel V.
Author
  IFREMER - Apremont Vincent
Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané , Brest , France
02 29 00 85 68
Author
  IFREMER - Dubreuil Christine
Author
  Eché Camille
Author
  UBO - Fabioux Caroline
Author
  Klopp Christophe
Author
  IFREMER - Sarradin Pierre-Marie
Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané , Brest , France
02 98 22 46 72
Author
  Tanguy Arnaud
Author
  IFREMER - Huvet Arnaud
Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané , Brest , France
02 98 22 46 93
02 98 22 46 53
Author
  IFREMER - Matabos Marjolaine
Centre Bretagne - ZI de la Pointe du Diable - CS 10070 - 29280 Plouzané , Brest , France
02 98 22 43 05
02 98 22 47 57
Publisher
  IFREMER
GEMET - INSPIRE themes, version 1.0
  • Habitats and biotopes
Thèmes Sextant
  • /Biological Environment/Bioinformatics
ODATIS aggregation parameters and Essential Variable names
  • Bioinformatics
Use limitation
Accès restreint jusqu'à la publication de l'article
Access constraints
Copyright
Use constraints
Copyright
Metadata language
Français
Character set
utf8 UTF8
Topic category
  • Environment
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Reference system identifier
EPSG / WGS 84 (EPSG:4326) / 8.6
Distribution format
  • ( )

OnLine resource
/home/ref-bioinfo-public/ifremer/lep/RhythmAndBlue ( NETWORK:LINK )
OnLine resource
Lien de téléchargement ( WWW:DOWNLOAD )
OnLine resource
DOI of the dataset ( DOI )

DOI of the dataset

Hierarchy level
Dataset
Statement
Environmental cycles strongly impact living organisms and have favored the selection of biological clocks, which temporally organize living systems from the molecular to the organism level. These clocks are innate, endogenous, have a genetic basis, and are entrained by external cues called zeitgebers (time-givers). They are also adaptive, as they confer organisms the ability to anticipate changes in their environments. Biological rhythms are ubiquitous across taxa, from cyanobacteria to vertebrates and plants. They are adaptive, as they confer organisms the ability to anticipate changes in their environments. In the darkness of these ecosystems, the deep oceans are not aperiodic zones and oceanic internal tides – internal waves with tidal periodicity – occur throughout all depths worldwide. In the Pacific and Atlantic Oceans, tidal and diurnal periodicities have been reported to influence vent species behavior and abundance at 2000 m depth. This work aims to investigate the temporal ecology and chronobiology of deep-sea ecosystems focusing on the mussel of genus Bathymodiolus, one of the dominant macroorganisms in chemosynthesis-based communities around hydrothermal vents and cold-water seeps in the deep sea. The project was designed to explore biological rhythms in the hydrothermal vent mussel Bathymodiolus azoricus. The experiment provides the first high-resolution temporal transcriptomes of an hydrothermal species, both in situ and in the laboratory.
File identifier
971d2c1a-51cc-49fd-882c-465970de8ed2 XML
Metadata language
English
Character set
UTF8
Hierarchy level
Dataset
Date stamp
2025-05-15T23:24:38.853229Z
Metadata standard name
ISO 19115-3 - SEXTANT ISO 19115-3 - SEXTANT
Metadata standard version
1.0
Point of contact
  Mat Audrey
 
 

Overviews

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Spatial extent

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Keywords

GEMET - INSPIRE themes, version 1.0
Habitats and biotopes
ODATIS aggregation parameters and Essential Variable names
Bioinformatics
Thèmes Sextant
/Biological Environment/Bioinformatics

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