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EUNIS Littoral biogenic habitat types (salt marshes), predicted distribution of habitat suitability - version 1, Nov. 2021

This metadata corresponds to the EUNIS Littoral biogenic habitat (salt marshes) types, predicted distribution of habitat suitability dataset.

Littoral habitats are those formed by animals such as worms and mussels or plants (salt marshes).

The verified littoral biogenic habitat samples used are derived from the Braun-Blanquet database (http://www.sci.muni.cz/botany/vegsci/braun_blanquet.php?lang=en) which is a centralised database of vegetation plots and comprises copies of national and regional databases using a unified taxonomic reference database. The geographic extent of the distribution data are all European countries except Armenia and Azerbaijan.

The modelled suitability for EUNIS saltmarsh habitat types is an indication of where conditions are favourable for the habitat type based on sample plot data (Braun-Blanquet database) and the Maxent software package. The modelled suitability map may be used as a proxy for the geographical distribution of the habitat type. However, note that it is not representing the actual distribution of the habitat type. As predictors for the suitabilty modelling not only Climate and Soil parameters have been taken into account, but also so-called RS-EVB's, Remote Sensing-enabled Essential Biodiversity Variables like Landuse, Vegetation height, Phenology, LAI(Leave Area Index) and Population density. Because the EBV's are restricted by the extent of the Remote Sensing data (EEA38 countries and the United Kingdom) the modelling result does also not go beyond this boundary. The dataset is provided both in Geodatabase and Geopackage formats.

The Training map files show the modelled suitable distribution, omitting the 10% of occurrence records in the least suitable environment under the assumption that they are not representative of the overall suitable habitat distribution. The 10 percentile training presence is an arbitrary threshold which omits all regions with habitat suitability lower than the suitability values for the lowest 10% of occurrence records.

Simple

Date (Publication)
2021-11-15
Date (Creation)
2019-03-01
Edition
01.00
Identifier
eea_r_3035_1_km_eunis-hab-m_p_1940-2017_v01_r00
Identifier
DAT-137-en
Unique resource identifier
10.2909/5b3e4da9-4c14-498c-b20e-bc514470eab5
Point of contact
  European Environment Agency
Kongens Nytorv 6 , Copenhagen , K , 1050 , Denmark
http://www.eea.europa.eu
Custodian
  European Environment Agency - Environmental data centre for biodiversity
Kongens Nytorv 6 , Copenhagen , K , 1050 , Denmark

Point of contact

No information provided.

Point of contact

No information provided.
Maintenance and update frequency
Not planned
GEMET - INSPIRE themes, version 1.0
  • Habitats and biotopes
Keywords
Keywords
GEMET
  • salt marsh
  • habitat
  • terrestrial ecosystem
  • modelling
  • natural area
Continents, countries, sea regions of the world.
  • EEA38 (from 2020)
  • United Kingdom
Spatial scope
  • European
EEA topics
  • Biodiversity
EEA Management Plan
  • 2021 1.1.4
Sous-regions marines
  • /Métropole
  • /Métropole/Manche mer du Nord
  • /Métropole/Mers Celtiques
  • /Métropole/Golfe de Gascogne
  • /Métropole/Méditerranée occidentale
Thématiques - SIMM
  • /Etat du Milieu/Habitats
Type de jeux de donnée - ODATIS
  • /Données dérivées/Données de type modèle
Access constraints
Other restrictions
Other constraints
no limitations to public access
Use constraints
Other restrictions
Other constraints
EEA standard re-use policy: unless otherwise indicated, re-use of content on the EEA website for commercial or non-commercial purposes is permitted free of charge, provided that the source is acknowledged (https://www.eea.europa.eu/legal/copyright). Copyright holder: European Environment Agency (EEA).
Spatial representation type
Grid
Distance
1  km
Metadata language
English
Topic category
  • Biota
N
S
E
W
thumbnail


Begin date
1940-01-01
End date
2017-12-31
Unique resource identifier
EPSG:3035
Distribution format
  • Geopackage ( 1 )

  • GDB ( )

OnLine resource
https://sdi.eea.europa.eu/webdav/datastore/public/eea_r_3035_1_km_eunis-hab-m_p_1940-2017_v01_r00/ ( EEA:FOLDERPATH )
OnLine resource
Direct download ( WWW:URL )
OnLine resource
Suitability Layer ( ESRI:REST )
OnLine resource
https://bio.discomap.eea.europa.eu/arcgis/services/EUNIS/Mosaic_Saltmarshes/ImageServer/WMSServer?request=GetCapabilities&service=WMS ( OGC:WMS )
OnLine resource
EUNIS documentation for habitat classification ( WWW:URL )
OnLine resource
https://doi.org/10.2909/5b3e4da9-4c14-498c-b20e-bc514470eab5 ( DOI )
Hierarchy level
Dataset

Conformance result

Date (Publication)
2010-12-08
Explanation
See the referenced specification
Statement

The database compiled for the Braun-Blanquet project is a compilation of various national and regional vegetation databases. The maintenance of these databases is in principle in the hands of the custodians. However, before uploading the databases into Braun-Blanquet database a quality check is performed by Alterra and Masaryk University. If possible, detected errors are corrected and reported back to the data provider. For the modelling of the habitat suitability map the Maxent software is used (http://www.cs.princeton.edu/~schapire/maxent/). The grid values in the map represent the probability (ranging from 0-1) that the cell is suitable for the habitat.

The grid file represents the habitat suitability of the EUNIS type. For the modelling the widely used software Maxent for maximum entropy modelling of species’ geographic distributions was used. Maxent is a general-purpose machine-learning method with a simple and precise mathematical formulation, and has a number of aspects that make it well-suited for species distribution modelling when only presence (occurrence) data but not absence data are available (Philips et al. 2006). Because EUNIS habitats have a particular species composition, they are assumed to respond to specific ecological requirements, allowing us to generate correlative estimates of geographic distributions. Modelling habitats that have been floristically defined is a well-known procedure for ecological modelling at local scales, and a promising technique to be applied also at the continental level.

The Maxent method considers presence data (known observations of a given entity) and the so-called background data. Background data comprise a set of points used to describe the environmental variation of the study area according to the available environmental layers. It is assumed that these layers represent well the most important ecological gradients on a European scale. As layers the following environmental parameters have been used: Potential Evapotranspiration, Topsoil pH, Solar radiation, Temperature Seasonality (standard deviation *100), Mean Temperature of Wettest Quarter, Annual Precipitation, Precipitation Seasonality (Coefficient of Variation), Precipitation of Warmest Quarter & Distance to water (rivers, lakes, sea) and the RS-EBV's (Remote Sensing-enabled Essential Biodiversity Variables) Inundation; occurrence, Phenology; End of Season (day number), Phenology; Length of season (days), Phenology; Low of season (day number), Phenology; NDVI mean, Phenology; NDVI seasonality, Phenology; Peak of season (day number), Phenology; Start of Season (day number), Vegetation height (m); Population density.

For more information on the RS-EBV's see https://www.synbiosys.alterra.nl/nextgeoss/docs/Description_Abiotic_and_RSEBVs.pdf

More information on the generation of the spatial files is provided in the documents available for download together with the dataset.

Source
  • EUNIS Littoral biogenic habitat types (salt marshes), distribution based on vegetation plot data - version 1, Nov. 2021
File identifier
5b3e4da9-4c14-498c-b20e-bc514470eab5 XML
Metadata language
English
Character set
UTF8
Hierarchy level
Dataset
Date stamp
2024-12-17T09:10:34.55137Z
Metadata standard name
ISO 19115/19139
Metadata standard version
1.0
Point of contact
  European Environment Agency
Kongens Nytorv 6 , Copenhagen , K , 1050 , Denmark
 
 

Overviews

overview

Spatial extent

N
S
E
W
thumbnail


Keywords

EEA Management Plan
2021 1.1.4
EEA topics
Biodiversity
GEMET
habitat modelling natural area salt marsh terrestrial ecosystem
GEMET - INSPIRE themes, version 1.0
Habitats and biotopes
Spatial scope
European
Thématiques - SIMM
/Etat du Milieu/Habitats
Type de jeux de donnée - ODATIS
/Données dérivées/Données de type modèle

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