The European Union’s Copernicus-funded TRUSTED project (Towards Fiducial Reference Measurements of Sea-Surface Temperature by European Drifters) has deployed over 100 state of the art drifting buoys for improved validation of Sea Surface Temperature (SST) from the Sentinel-3 Sea and Land Surface Temperature Radiometers (SLSTR). These buoys are manufactured by NKE. The TRUSTED drifting buoys data and metadata are distributed in qualtity control NetCDF files, as a subset of DBCP drifting buoys GDAC (Global Data Assembly Centre). Coriolis DAC  (Data Assembly Centre) routinely collects, decodes, quality controls, preserves and distributes data and metadata as NetCDF-CF files. The TRUSTED buoys have specific features managed by Coriolis DAC python data processing chain: a high resolution temperature sensor in addition to the classic drifting buoy temperature sensor. The high sampling and high resolution observations are distributed in specific variables TEMP_HR, TEMP_HR_SPOT, TEMP_HR_XX (XX is the percentile sample).  

The network was initiated by IFREMER from 1993 to 2009 (under the acronym REMORA) to study the rearing performance of the Pacific oyster Crassostrea gigas at a national scale. To do so, the network monitored annually the mortality and growth of standardized batches of 18-month-old oysters. Starting in 1995, the monitoring of the rearing performance of 6-month-old oyster spat was integrated into this network. These sentinel batches were distributed simultaneously each year on 43 sites and were monitored quarterly. These sites were distributed over the main French oyster farming areas and allowed a national coverage of the multiannual evolution of oyster farming performances. Most of the sites were located on the foreshore at comparable levels of immersion. Field studies were carried out by the "Laboratoires Environnement Ressources" (LER) for the sites included in their geographical area of investigation. Following the increase in spat mortality in 2008, the network evolved in 2009 (under the acronym RESCO). From this date, the network selected 13 sites among the 43 sites previously monitored in order to increase the frequency of visits (twice a month) and the number of sentinel batches. More precisely, sentinel batches of oysters corresponding to different origins (wild or hatchery, diploid or triploid) and to two rearing age classes (spat or 18-month-old adults) were selected. The monitoring of environmental variables (temperature, salinity) associated with the 13 sites was also implemented. The actions of the network have thus contributed to disentangle the biotic and abiotic parameters involved in mortality phenomena, taking into account the different compartments (environment / host / infectious agents) likely to interact with the evolution of oyster rearing performance. Finally, since 2015, the network has merged the RESCO and VELYGER networks to adopt the acronym ECOSCOPA. The general objective of this current network is to analyze the causes of spatio-temporal variability of the main life traits (Larval stage - Recruitment - Reproduction - Growth - Survival - Cytogenetic abnormalities) of the cupped oyster in France and to follow their evolution on the long term in the context of climate change. To do this, the network proposes a regular spatio-temporal monitoring of the major proxies of the life cycle of the oyster, organized in three major thematic groups: (1) proxies related to growth, physiological tolerance and survival of experimental sentinel populations over 3 age classes: (2) proxies related to reproduction, larval phase and recruitment of the species throughout its natural range in France, and: (3) proxies related to environmental parameters essential to the species (weather conditions, temperature, salinity, pH, turbidity, chlorophyll a and phytoplankton) at daily or sub-hourly frequencies. Working in a geographical network associating several laboratories, ECOSCOPA provide these monitoring within 8 sites selected among the previous ones to ensure the continuity of the data acquisition. Today, these 8 sites are considered as ecosystems of common interest, contrasted, namely : - The Thau lagoon - The Arcachon basin - The Marennes Oléron basin - The Bourgneuf Bay - The bay of Vilaine - The bay of Brest - The bay of Mont Saint Michel - The bay of Veys The ECOSCOPA network is therefore one of the relevant monitoring tools on a national scale, allowing to objectively measure through different proxies the general state of health of cultivated and wild oyster populations, and this for the different sensitive phases of their life cycle. This network aims at allowing a better evaluation, on the long term, of the biological risks incurred by the sector but also by the ecosystems, in particular under the increasing constraint of climatic and anthropic changes. Figure : Sites monitored by the ECOSCOPA network  

Inorganic carbon and alkalinity measurements (in micromoles/kg) along the coast of Brazil, 2013-2015.  

Worldwide, shellfish aquaculture and fisheries in coastal ecosystems represent crucial activities for human feeding. But these biological productions are under the pressure of climate variability and global change. Anticipating the biological processes affected by climate hazards remains a vital objective for species conservation strategies and human activities that rely on. Within marine species, filter feeders like oysters are real key species in coastal ecosystems due to their economic and societal value (fishing and aquaculture) but also due to their ecological importance. Indeed oysters populations in good health play the role of ecosystem engineers that can give many ecosystem services at several scales: building reef habitats that contribute to biodiversity, benthic-pelagic coupling and phytoplankton bloom control through water filtration, living shorelines against coastal erosion… The Pacific oyster, Crassostrea gigas (Thunberg, 1793), which is currently widespread worldwide, was introduced into the Atlantic European coasts at the end of the 19th century for shellfish culture purposes and becomes the main marine species farmed in France (around 100 000 tons) despite severe mortalities crisis. But in the same time and because of warming, natural oysters beds has spread significantly along the French coast and are supposed to have reach approximately 500 000 tons. In that context, Pacific oyster populations (natural and cultivated) in France are the subjects of many scientific projects. Among them, a specific long-term biological monitoring focuses on the reproduction of these populations at a national scale: the VELYGER national program. With more than 8 years of weekly data at many stations in France, this field-monitoring program offers a valuable dataset for studying processes underpinning reproduction cycle of this key-species in relation to environmental parameters, water quality and climate change.   Database content: Larval concentration (number of individuals per 1.5 m3) monitored, since 2008, at several stations in six bays of the French coast (from south to north): Thau Lagoon and bays of Arcachon, Marennes Oléron, Bourgneuf, Vilaine and Brest (see map below).   Methods used to monitor larval concentration: An important volume of seawater (1.5 m3) is pumped twice a week throughout the spawning season (june-september), at one meter below the surface at high tide (+/- 2h) in several sites within each VELYGER ecosystem. Water is filtered trough plankton net fitted with 40 µm mesh. After a proper rinsing of the net, the retained material is transferred into a polyethylene bottle (1 liter) and fixed with alcohol. At laboratory, sample is then gently filtered and rinse again and transferred into eprouvette. Two sub-samples of 1 mL are then taken using a pipette and examined on a graticule slide for microscope. The microscopic examination is made with a conventional binocular optical microscope with micrometer stage at a magnification of 10 X (or above). During the counting, a special care is necessary as larvae of other bivalves are also collected and confusion is possible. Larvae of C. gigas are also classified into four stage of development: - Stage I = D-shaped straight hinge larvae (shell length <105 µm) - Stage II = Early umbo evolved larvae (shell length between 105 and 150 µm) - Stage III = Medium umbo larvae (shell length between 150 and 235 µm) - Stage IV*= Large umbo eyed pediveliger larvae (shell length > 235 µm) * Larvae that are very closed to settle are sometimes identified into a separated 5th stage, but generally this stage is included in stage IV.   Illustrations: Location of the different Velyger sites along the French coast. From south to north: Thau Lagoon and bays of Arcachon, Marennes Oléron, Bourgneuf, Vilaine and Brest.   Legend: Pacific Oyster Larvae (left side) and Natural oyster bed (right side). Photos : © S. Pouvreau/Ifremer

The data file present detailed individual congener/compound concentrations  for a large variety of hydrophobic organic contaminants including polychlorinated biphenyls (PCBs), organochlorine pesticides (OCPs), legacy and alternative brominated flame retardants (BFRs) and per- and polyfluoroalkyl substances (PFASs) in meso- and bathypelagic organisms collected in the Bay of Biscay, northeast Atlantic, in October 2017. The studied species include 3 crustacean species (Pasiphaea sivado, Sergia robusta, Ephyrina figueirai) and 11 fish species (Xenodermichthys copei, Searsia koefoedi, Myctophum punctatum, Notoscopelus kroeyeri, Lampanyctus crocodilus, Argyropelecus olfersii, Arctozenus risso, Stomias boa, Serrivomer beanii, Chauliodus sloani, Aphanopus carbo). The organisms were collected at night during one single trawling using a 25 m vertical opening pelagic trawl in the deep scattering layer (ca 800 m depth in the water column; 1330 m bottom floor). This dataset was used in the article entitled "A large diversity of organohalogen contaminants reach the meso- and bathypelagic organisms in the Bay of Biscay (northeast Atlantic)" published in Marine Pollution Bulletin.

Inorganic carbon and alkalinity measurements (in micromoles/kg) from Brazilian cruises in the Western Tropical Atlantic.

The data-set is composed of three tables, Environmental variables, Phytoplankton ( in log+1 abundance)  and the coordinates of the station used in the study. They are the processed data.

During the SARDINIA experiment, three coincident MCS reflection and wide-angle seismic profiles, sub-bottom high resolution (CHIRP) profiles, and bathymetry data were collected on the Gulf of Lion margin. The seismic reflection data were acquired using a 4.5 km, 360 trace digital streamer and a tuned airgun array of 8260 in3, towed at a depth of 18-28 m. A total of 57 ocean bottom seismometer/ hydrophones (OBS/OBH) from Ifremer, University of Brest, and Geomar Kiel were deployed in the Gulf of Lion, spaced every 7 Nm (~13 km). The airgun array consists of 16 airguns ranging from 100 in3 G-guns to 16 L Bolt airguns, with main frequencies centered around 10-15 Hz. The airguns were tuned to the first bubble to enhance low frequencies and ensure a good penetration. The shot interval was 60 s at an average speed of 5 knots, which translates to a trace spacing of about 140-150 m. The sample rate was 8 ms for the micrOBS, 5 ms for the Geomar’s OBS and 4 ms for the OldOBS. A total of 6160 shots (profile AB: 3032, profile CD: 1730, profile EF: 1398) were fired by the air gun array. Profile AB crosses the Gulf of Lion’s margin, parallel to the ECORS profile, from the continental shelf to Domain III. Twenty-five ocean bottom seismometers (OBS) were deployed on this profile, of 467 km in length. Twenty-two instruments were used in the wide-angle modelling, since three instruments (OBS 45, 49 and 52) did not properly record. The shots on this profile were additionally recorded by 9 land seismic stations (OSIRIS stations from the University of Brest and Geosciences Azur) that have extended the marine profile ~120 km onshore. Profiles CD and EF are 250 and 210 km long transects parallel to the margin. Profile CD was acquired using 19 OBS of which 18 yielded usable data. Profile EF was acquired using 15 OBS of which 12 yielded usable data. These two profiles cross the profile AB, respectivelyat OBS 26  and OBS 8.

The In Situ delayed mode product designed for reanalysis purposes integrates the best available version of in situ data for ocean surface currents. The data are collected from the Surface Drifter Data Assembly Centre (SD-DAC at NOAA AOML). All surface drifters data have been processed to check for drogue loss. Drogued and undrogued drifting buoy surface ocean currents are provided with a drogue presence flag as well as a wind slippage correction for undrogued buoys. Altimeter and wind data have been used to extract the direct wind slippage from the total drifting buoy velocities. This product is designed to be assimilated into or for validation purposes of operational models operated by ocean forecasting centers for reanalysis purposes or for research community. These users need data aggregated and quality controlled in a reliable and documented manner.

The continuously updated version of Copernicus Argo floats realtime currents product is distributed from Copernicus Marine catalogue: - https://resources.marine.copernicus.eu/?option=com_csw&view=details&product_id=INSITU_GLO_UV_NRT_OBSERVATIONS_013_048 The Argo current product generated by Copernicus in situ TAC is derived from the original trajectory data from Argo GDAC (Global Data Assembly Center) available at: - Argo float data and metadata from Global Data Assembly Centre (Argo GDAC). SEANOE. https://doi.org/10.17882/42182 In 2021, the GDAC distributes data from more than 15,000 Argo floats. Deep ocean current is calculated from floats drift at parking depth, surface current is calculated from float surface drift. An Argo float drifts freely in the global ocean, performing regular observation cycles. An observation cycle usually spreads over 10 days :  - a surface descent to a parking depth (generally 1500 meters deep) - a 10-day drift at this parking depth - an ascent to the surface (vertical profile) - A short surface drift for data transmission The data transmitted at each cycle contain temperature, salinity observations (and additional biogeochemical parameters if applicable), positions (gps or argos), technical data. The ocean current product contains a NetCDF file for each Argo float. It is updated daily in real time by automated processes. For each cycle it contains the surface and deep current variables: - Date (time, time_qc) - Position  (latitude, longitude, position_qc) - Pressure (pres, pres_qc, representative_park_pressure for parking drift, 0 decibar for surface drift) - Current (ewct, ewct_qc, nsct, nsct_qc; the current vector is positioned and dated at the last position of the N-1 cycle) - Duration (days) of the current variable sampling (time_interval) - Grounded indicator - Positions and dates have a QC 1 (good data). Positions and dates that do not have a QC 1 are ignored. The positions are measured during the surface drift (Argos or GPS positioning). For the deep current of cycle N, we take the last good position of cycle N-1 and the first good position of cycle N. For the surface current of cycle N, we take the first and last good position of the N cycle.