Raw reads for the assembly of Gambusia holbrooki genome.

WGS for Iatlantic projet ( ) for assessing past and present connectivity

This dataset consists of metatranscriptomic sequencing reads corresponding to coastal micro-eukaryote communities sampled in Western Europe in 2018 and 2019.

DNA sequencing of Crassostrea gigas Pacific oyster spat infected in the wild with OsHV-1 virus in 4 French oyster basins (Marennes Oleron Bay, Arcachon bay, Rade de Brest and Thau lagoon).

Sequenced samples are city center wastewater sampled by passive samplers. Variants are identified by Illumina Miseq sequencing.

Study of the composition of the microbiota of healthy C.gigas oysters after injection of Cg-BigDef1 at T0, T6 and T24 by 16S metabarcoding analysis.

Metabarcoding using 16SrDNA was used to estimate the effect of 5 protective cultures on the microbiome of two cold-smoked products.

Comparison between 3 kits, Roche, Twist Biosciences and Illumina on the ability to enrich environmental samples to viral sequences. 5 sewage samples were extracted in triplicats with selective extraction protocol.

scRNA-seq reads from a Pacific oyster (Crassostrea gigas) hemocyte preparation. Hemocytes were isolated from a unique immunologically naive animal (Ifremer Standardized Animal, 18 months) and single-cell drop-seq technology was applied to 3,000 individual hemocytes.

Develop parentage assignment panels using genetic fingerprinting of pearl oysters for use in commercial hatcheries and research to manage pedigrees in order to limit the risks of loss of genetic variability and increased inbreeding of commercial lines.