Bioinformatics
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WGS of SARS-CoV-2 by Oxford Nanopore Technology from raw wastewater samples collected in France, 2020-2021
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WGS for Iatlantic projet ( ) for assessing past and present connectivity
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Raw reads for the assembly of Gambusia holbrooki genome.
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This dataset consists of metatranscriptomic sequencing reads corresponding to coastal micro-eukaryote communities sampled in Western Europe in 2018 and 2019.
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Vibrio bacteria sampled from juvenile oysters and seawater collected in Thau Lagoon (Languedoc-Roussillon, France) in October 2015 during a mortality event were genotyped using hsp60, rctB, topA and mreB protein-coding genes
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In order to better characterize the fish biodiversity associated to the presence of cetaceans, especially the common Dolphin, from the Bay of Biscay, sequences from a 16S fragment were obtained from water samples acquired close to groups of dolphins.
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DNA sequencing of Crassostrea gigas Pacific oyster spat experimentally infected with OsHV-1 virus from oyster basin of Marennes-Oleron
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In the framework of the PALDIAG project, environmental DNA from seawater was gathered in 2023 in Thau and Berre lagoons and studied with a 16S marker in order to detect the Veneroidae species.
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Successive infections with Vibrio harveyi were conducted in two populations of the European abalone in order to examine which genes may be involved in improved survival to the disease in the St. Malo population.