Moving 6-year analysis of Water body dissolved oxygen concentration in the Mediterranean Sea for each season: - winter: January-March, - spring: April-June, - summer: July-September, - autumn: October-December. Every year of the time dimension corresponds to the 6-year centered average of the season. 6-years periods span from 1971-1976 until 2017-2022. Data Sources: observational data from SeaDataNet/EMODNet Chemistry Data Network. Description of DIVA analysis: The computation was done with the DIVAnd (Data-Interpolating Variational Analysis in n dimensions), version 2.7.9, using GEBCO 30sec topography for the spatial connectivity of water masses. The horizontal resolution of the produced DIVAnd maps grids is dx=dy=0.125 degrees (around 13.5km and 10.9km accordingly). The vertical resolution is 27 depth levels: [0.,5.,10.,20.,30.,50.,75.,100.,125.,150.,200.,250.,300.,400.,500.,600.,700.,800.,900.,1000.,1100.,1200.,1300.,1400.,1500.,1750.,2000.]. The horizontal correlation length is 200km. The vertical correlation length (in meters) was set twices the vertical resolution: [10.,10.,20.,20.,40.,50.,50.,50.,50.,100.,100.,100.,200.,200.,200.,200.,200.,200.,200.,200.,200.,200.,200.,200.,500.,500.,500.]. Duplicates check was performed using the following criteria for space and time: dlon=0.001deg., dlat=0.001deg., ddepth=1m, dtime=1hour, dvalue=0.1. The error variance (epsilon2) was set equal to 1 for profiles and 10 for time series to reduce the influence of close data near the coasts. An anamorphosis transformation was applied to the data (function DIVAnd.Anam.loglin) to avoid unrealistic negative values: threshold value=200. A background analysis field was used for all years (1971-2022) with correlation length equal to 600km and error variance (epsilon2) equal to 20. Quality control of the observations was applied using the interpolated field (QCMETHOD=3). Residuals (differences between the observations and the analysis (interpolated linearly to the location of the observations) were calculated. Observations with residuals outside the minimum and maximum values of the 99% quantile were discarded from the analysis. Originators of Italian data sets-List of contributors: - Brunetti Fabio (OGS) - Cardin Vanessa, Bensi Manuel doi:10.6092/36728450-4296-4e6a-967d-d5b6da55f306 - Cardin Vanessa, Bensi Manuel, Ursella Laura, Siena Giuseppe doi:10.6092/f8e6d18e-f877-4aa5-a983-a03b06ccb987 - Cataletto Bruno (OGS) - Cinzia Comici Cinzia (OGS) - Civitarese Giuseppe (OGS) - DeVittor Cinzia (OGS) - Giani Michele (OGS) - Kovacevic Vedrana (OGS) - Mosetti Renzo (OGS) - Solidoro C.,Beran A.,Cataletto B.,Celussi M.,Cibic T.,Comici C.,Del Negro P.,De Vittor C.,Minocci M.,Monti M.,Fabbro C.,Falconi C.,Franzo A.,Libralato S.,Lipizer M.,Negussanti J.S.,Russel H.,Valli G., doi:10.6092/e5518899-b914-43b0-8139-023718aa63f5 - Celio Massimo (ARPA FVG) - Malaguti Antonella (ENEA) - Fonda Umani Serena (UNITS) - Bignami Francesco (ISAC/CNR) - Boldrini Alfredo (ISMAR/CNR) - Marini Mauro (ISMAR/CNR) - Miserocchi Stefano (ISMAR/CNR) - Zaccone Renata (IAMC/CNR) - Lavezza, R., Dubroca, L. F. C., Ludicone, D., Kress, N., Herut, B., Civitarese, G., Cruzado, A., Lefèvre, D.,Souvermezoglou, E., Yilmaz, A., Tugrul, S., and Ribera d'Alcala, M.: Compilation of quality controlled nutrient profiles from the Mediterranean Sea, doi:10.1594/PANGAEA.771907, 2011.

This product displays for Tributyltin, median values of the last 6 available years that have been measured per matrix and are present in EMODnet validated datasets. The median values ranges are derived from the following percentiles: 0-25%, 25-75%, 75-90%, >90%. Only "good data" are used, namely data with Quality Flag=1, 2, 6, Q (SeaDataNet Quality Flag schema). For water, only surface values are used (0-15 m), for sediment and biota data at all depths are used.

Moving 6-year analysis of Water body chlorophyll-a in the Mediterranean Sea for each season: - winter: January-March, - spring: April-June, - summer: July-September, - autumn: October-December. Every year of the time dimension corresponds to the 6-year centered average of the season. 6-years periods span from 1990-1995 until 2016-2021. Data Sources: observational data from SeaDataNet/EMODNet Chemistry Data Network. Units: mg/m3. Description of DIVA analysis: The computation was done with the DIVAnd (Data-Interpolating Variational Analysis in n dimensions), version 2.7.9, using GEBCO 30sec topography for the spatial connectivity of water masses. The horizontal resolution of the produced DIVAnd maps grids is dx=dy=0.125 degrees (around 13.5km and 10.9km accordingly). The vertical resolution is 20 depth levels: [0.,5.,10.,20.,30.,50.,75.,100.,125.,150.,200.,250.,300.,400.,500.,600.,700.,800.,900.,1000.]. The horizontal correlation length is 200km. The vertical correlation length (in meters) was set twices the vertical resolution: [10.,10.,20.,20.,40.,50.,50.,50.,50.,100.,100.,100.,200.,200.,200.,200.,200.,200.,200.,200.]. Duplicates check was performed using the following criteria for space and time: dlon=0.001deg., dlat=0.001deg., ddepth=1m, dtime=1hour, dvalue=0.1. The error variance (epsilon2) was set equal to 1 for profiles and 10 for time series to reduce the influence of close data near the coasts. An anamorphosis transformation was applied to the data (function DIVAnd.Anam.loglin) to avoid unrealistic negative values: threshold value=200. A background analysis field was used for all years (1990-2021) with correlation length equal to 600km and error variance (epsilon2) equal to 20. Quality control of the observations was applied using the interpolated field (QCMETHOD=3). Residuals (differences between the observations and the analysis (interpolated linearly to the location of the observations) were calculated. Observations with residuals outside the minimum and maximum values of the 99% quantile were discarded from the analysis. Originators of Italian data sets-List of contributors: - Brunetti Fabio (OGS) - Cardin Vanessa, Bensi Manuel doi:10.6092/36728450-4296-4e6a-967d-d5b6da55f306 - Cardin Vanessa, Bensi Manuel, Ursella Laura, Siena Giuseppe doi:10.6092/f8e6d18e-f877-4aa5-a983-a03b06ccb987 - Cataletto Bruno (OGS) - Cinzia Comici Cinzia (OGS) - Civitarese Giuseppe (OGS) - DeVittor Cinzia (OGS) - Giani Michele (OGS) - Kovacevic Vedrana (OGS) - Mosetti Renzo (OGS) - Solidoro C.,Beran A.,Cataletto B.,Celussi M.,Cibic T.,Comici C.,Del Negro P.,De Vittor C.,Minocci M.,Monti M.,Fabbro C.,Falconi C.,Franzo A.,Libralato S.,Lipizer M.,Negussanti J.S.,Russel H.,Valli G., doi:10.6092/e5518899-b914-43b0-8139-023718aa63f5 - Celio Massimo (ARPA FVG) - Malaguti Antonella (ENEA) - Fonda Umani Serena (UNITS) - Bignami Francesco (ISAC/CNR) - Boldrini Alfredo (ISMAR/CNR) - Marini Mauro (ISMAR/CNR) - Miserocchi Stefano (ISMAR/CNR) - Zaccone Renata (IAMC/CNR) - Lavezza, R., Dubroca, L. F. C., Ludicone, D., Kress, N., Herut, B., Civitarese, G., Cruzado, A., Lefèvre, D.,Souvermezoglou, E., Yilmaz, A., Tugrul, S., and Ribera d'Alcala, M.: Compilation of quality controlled nutrient profiles from the Mediterranean Sea, doi:10.1594/PANGAEA.771907, 2011.

Fronts are ubiquitous discrete features of the global ocean often associated with enhanced vertical velocities, in turn boosting primary production and so forth. Fronts thus form dynamical and ephemeral ecosystems where numerous species meet across all trophic levels. Fronts are also targeted by fisheries. Capturing ocean fronts and studying their long-term variability in relation with climate change is thus key for marine resource management and spatial planning. The Mediterranean Sea and the Southwest Indian Ocean are natural laboratories to study front-marine life interactions due to their energetic flow at sub-to-mesoscales, high biodiversity (including endemic and endangered species) and numerous conservation initiatives. Based on remotely-sensed Sea Surface Temperature and Height, we compute thermal fronts (2003-2020) and attracting Lagrangian Coherent Structures (1994-2020), in both regions over several decades. We advocate for the combined use of both thermal fronts and attracting Lagrangian Coherent Structures to study front-marine life interactions. The resulting front database differs from other alternatives by its high spatio-temporal resolution, long time coverage, and relevant thresholds defined for ecological provinces.

This visualization product displays the density of floating micro-litter per net normalized per km² per year from research and monitoring protocols. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Before 2021, there was no coordinated effort at the regional or European scale for micro-litter. Given this situation, EMODnet Chemistry proposed to adopt the data gathering and data management approach as generally applied for marine data, i.e., populating metadata and data in the CDI Data Discovery and Access service using dedicated SeaDataNet data transport formats. EMODnet Chemistry is currently the official EU collector of micro-litter data from Marine Strategy Framework Directive (MSFD) National Monitoring activities (descriptor 10). A series of specific standard vocabularies or standard terms related to micro-litter have been added to SeaDataNet NVS (NERC Vocabulary Server) Common Vocabularies to describe the micro-litter. European micro-litter data are collected by the National Oceanographic Data Centres (NODCs). Micro-litter map products are generated from NODCs data after a test of the aggregated collection including data and data format checks and data harmonization. A filter is applied to represent only micro-litter sampled according to research and monitoring protocols as MSFD monitoring. Densities were calculated for each net using the following calculation: Density (number of particles per km²) = Micro-litter count / (Sampling effort (km) * Net opening (cm) * 0.00001) When the number of microlitters or the net opening was not filled, the density could not be calculated. Percentiles 50, 75, 95 & 99 have been calculated taking into account data for all years. Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the National Oceanographic Data Centre (NODC) for this area.

'''DEFINITION''' The OMI_CLIMATE_SST_BAL_area_averaged_anomalies product includes time series of monthly mean SST anomalies over the period 1993-2022, relative to the 1993-2014 climatology, averaged for the Baltic Sea. The SST Level 4 analysis products that provide the input to the monthly averages are taken from the reprocessed product SST_BAL_SST_L4_REP_OBSERVATIONS_010_016 with a recent update to include 2022. The product has a spatial resolution of 0.02 in latitude and longitude. The OMI time series runs from Jan 1, 1993 to December 31, 2022 and is constructed by calculating monthly averages from the daily level 4 SST analysis fields of the SST_BAL_SST_L4_REP_OBSERVATIONS_010_016 product from 1993 to 2022. See the Copernicus Marine Service Ocean State Reports (section 1.1 in Von Schuckmann et al., 2016; section 3 in Von Schuckmann et al., 2018) for more information on the OMI product. '''CONTEXT''' Sea Surface Temperature (SST) is an Essential Climate Variable (GCOS) that is an important input for initialising numerical weather prediction models and fundamental for understanding air-sea interactions and monitoring climate change (GCOS 2010). The Baltic Sea is a region that requires special attention regarding the use of satellite SST records and the assessment of climatic variability (Høyer and She 2007; Høyer and Karagali 2016). The Baltic Sea is a semi-enclosed basin with natural variability and it is influenced by large-scale atmospheric processes and by the vicinity of land. In addition, the Baltic Sea is one of the largest brackish seas in the world. When analysing regional-scale climate variability, all these effects have to be considered, which requires dedicated regional and validated SST products. Satellite observations have previously been used to analyse the climatic SST signals in the North Sea and Baltic Sea (BACC II Author Team 2015; Lehmann et al. 2011). Recently, Høyer and Karagali (2016) demonstrated that the Baltic Sea had warmed 1-2 oC from 1982 to 2012 considering all months of the year and 3-5 oC when only July-September months were considered. This was corroborated in the Ocean State Reports (section 1.1 in Von Schuckmann et al., 2016; section 3 in Von Schuckmann et al., 2018). '''CMEMS KEY FINDINGS''' The basin-average trend of SST anomalies for Baltic Sea region amounts to 0.048±0.006°C/year over the period 1993-2022 which corresponds to an average warming of 1.44°C. Adding the North Sea area, the average trend amounts to 0.029±0.003°C/year over the same period, which corresponds to an average warming of 0.87°C for the entire region since 1993. '''Figure caption''' Time series of monthly mean (turquoise line) and annual mean (blue line) of sea surface temperature anomalies for January 1993 to December 2022, relative to the 1993-2014 mean, combined for the Baltic Sea and North Sea SST (OMI_CLIMATE_SST_BAL_area_averaged_anomalies). The data are based on the multi-year Baltic Sea L4 satellite SST reprocessed product SST_BAL_SST_L4_REP_OBSERVATIONS_010_016. '''DOI (product):''' https://doi.org/10.48670/moi-00205

'''DEFINITION''' The OMI_EXTREME_WAVE_IBI_swh_mean_and_anomaly_obs indicator is based on the computation of the 99th and the 1st percentiles from in situ data (observations). It is computed for the variable significant wave height (swh) measured by in situ buoys. The use of percentiles instead of annual maximum and minimum values, makes this extremes study less affected by individual data measurement errors. The percentiles are temporally averaged, and the spatial evolution is displayed, jointly with the anomaly in the target year. This study of extreme variability was first applied to sea level variable (Pérez Gómez et al 2016) and then extended to other essential variables, sea surface temperature and significant wave height (Pérez Gómez et al 2018). '''CONTEXT''' Projections on Climate Change foresee a future with a greater frequency of extreme sea states (Stott, 2016; Mitchell, 2006). The damages caused by severe wave storms can be considerable not only in infrastructure and buildings but also in the natural habitat, crops and ecosystems affected by erosion and flooding aggravated by the extreme wave heights. In addition, wave storms strongly hamper the maritime activities, especially in harbours. These extreme phenomena drive complex hydrodynamic processes, whose understanding is paramount for proper infrastructure management, design and maintenance (Goda, 2010). '''CMEMS KEY FINDINGS''' The mean 99th percentiles showed in the area present a wide range from 2-3m in the Canary Island with 0.1-0.3 m of standard deviation (std), 3.5m in the Gulf of Cadiz with 0.5m of std, 4-6m in the English Channel 0.5-0.6m of std, 4-7m in the Bay of Biscay with 0.4-0.9m of std to 8m in the West of the British Isles with 0.7m of std. Results for this year show slight negative anomalies in the Canary Island (-0.1/-0.17m), moderate negative anomaly in the Gulf of Cadiz (-0.7m) and general positive anomaly in the rest of the area, with moderate values in the Bay of Biscay (+0.16/+1.1) and the English Channel (-0.6/+0.8m) and an appreciable positive value in the West of the British Isles over the standard deviation (+1.5m). Severe storms developed in the Atlantic during 2020 reached the West of the British Isles and the Bay of Biscay, like Storm Brendan in January, Storm Dennis in February or Storms Ernesto and Bella in December. These storms produced waves with significant wave height over 9 m recorded by the buoys in the area. '''DOI (product):''' https://doi.org/10.48670/moi-00250

This visualization product displays beaches locations where non-MSFD monitoring surveys, research & cleaning operations have been applied to collate data on macrolitter (> 2.5 cm). Reference lists associated with these protocols have been indicated with different colors in the map. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Since the beginning of 2018, data of beach litter have been gathered and processed in the EMODnet Chemistry Marine Litter Database (MLDB). The harmonization of all the data has been the most challenging task considering the heterogeneity of the data sources, sampling protocols and reference lists used on a European scale. Preliminary processing were necessary to harmonize all the data: - Exclusion of OSPAR 1000 protocol: in order to follow the approach of OSPAR that it is not including these data anymore in the monitoring; - Selection of surveys from non-MSFD monitoring, cleaning and research operations; - Exclusion of beaches without coordinates; - Some categories & some litter types like organic litter, small fragments (paraffin and wax; items > 2.5cm) and pollutants have been removed. The list of selected items is attached to this metadata. This list was created using EU Marine Beach Litter Baselines and EU Threshold Value for Macro Litter on Coastlines from JRC (these two documents are attached to this metadata). More information is available in the attached documents. Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the Marine Litter Database for this area.

This visualization product displays the density of floating micro-litter per net normalized per km² per year from specific protocols different from research and monitoring protocols. EMODnet Chemistry included the collection of marine litter in its 3rd phase. Before 2021, there was no coordinated effort at the regional or European scale for micro-litter. Given this situation, EMODnet Chemistry proposed to adopt the data gathering and data management approach as generally applied for marine data, i.e., populating metadata and data in the CDI Data Discovery and Access service using dedicated SeaDataNet data transport formats. EMODnet Chemistry is currently the official EU collector of micro-litter data from Marine Strategy Framework Directive (MSFD) National Monitoring activities (descriptor 10). A series of specific standard vocabularies or standard terms related to micro-litter have been added to SeaDataNet NVS (NERC Vocabulary Server) Common Vocabularies to describe the micro-litter. European micro-litter data are collected by the National Oceanographic Data Centres (NODCs). Micro-litter map products are generated from NODCs data after a test of the aggregated collection including data and data format checks and data harmonization. A filter is applied to represent only micro-litter sampled according to a very specific protocol such as the Volvo Ocean Race (VOR) or Oceaneye. Densities were calculated for each net using the following calculation: Density (number of particles per km²) = Micro-litter count / (Sampling effort (km) * Net opening (cm) * 0.00001) When the number of microlitters or the net opening was not filled, the density could not be calculated. Percentiles 50, 75, 95 & 99 have been calculated taking into account data for all years. Warning: the absence of data on the map doesn't necessarily mean that they don't exist, but that no information has been entered in the National Oceanographic Data Centre (NODC) for this area.

Here, our study aimed to first assess the influence of plastic on the bacterial community belonging to water, plastic and the microbiome of the giant clam and on the organism's physiology of this putative sentinel species. Our second objective was to identify bacteria whose abundance varies significantly with plastic concentration. Overall, this study will fill the gap towards a better understanding of the impact of plastic pollution on bacterial community assemblages in both inert and living environments.