Analysis of tuna stomach contents

Data available in the French Coast

A ten-year numerical hindcast of hydrodynamics, hydrology and sediment dynamics in the Loire Estuary (France), produced by coupling the hydrodynamics model MARS3D with the sediment dynamics module MUSTANG and the wave spectral model WAVEWATCH III®. Numerical simulations are based on the same model chain used in the Seine Estuary (curviseine) and the Gironde Estuary (curvigironde).

This dataset provides global surface winds and pressure fields on a 0.25° resolution horizontal grid with hourly frequency, based on the global ERA5 reanalysis but with enhanced realistic TCs, built from a parametric wind formulation fitted to SAR high-resolution observations. TC wind structures in ERA5 are indeed known to be strongly biased. The methodology, developed in Herry et al. (2025) and applied here, is to replace ERA5 underestimated winds in TCs by the parametric wind formulation of Wood et al. (2013) with optimized parameters (fitted to SAR data), while keeping ERA5 wind field elsewhere. The wind profile and the transition area between the parametric and ERA5 winds are adjusted for each TC, according to its intensity and size. This blended product manages to represent a variety of realistic TC structures, and ensure an asymmetry associated to the synoptic flow for each case.

Daily and monthly surface wind analyses are determined as gridded wind products over global oceans, with regular spatial resolution of 0.25° in latitude and longitude. They are estimated from scatterometer wind retrievals (L2b data). According to the scatterometer sampling scheme, the objective method allowing the determination of regular in space surface wind fields uses remotely sensed observations as well as ECMWF analyses. The calculation of daily estimates uses ascending as well as descending available and valid retrievals. The objective method aims to provide daily-averaged gridded wind speed, zonal component, meridional component, wind stress and the corresponding components at global scale. The error associated to each parameter, related to the sampling impact and wind space and time variability, is provided too. Monthly wind analyses are calculated from daily estimates.

Planning units layers used for ATLAS EU prioritization scenarios on the North Atlantic (18°N to 76°N and 36°E to 98°W). This raster layer is designed on a grid of 25km * 25km resolution, that served to extract all the spatial data used prioritization. The 31 518 planning units (cells with value) corresponded to areas containing depths shallower or equal to 3500m, even if they could also contain deeper areas locally. For connectivity scenarios, only the planning units matching with the extent of available connectivity data were selected. One layer allocates planning units to the 13 geographical provinces (values ranging from 1 to 13) created for the purpose of prioritization. This dataset was built to feed a basin-wide spatial conservation planning exercise, targeting the deep sea of the North Atlantic. The goal of this approach was to identify conservation priority areas for Vulnerable Marine Ecosystems (VMEs) and deep fish species, based on the distribution of species and habitats, human activities and current spatial management.

Distribution of three bathymetric terrain variables (depth, slope and Bathymetric Position Index) on the North Atlantic (18°N to 76°N and 36°E to 98°W). This dataset originated from three source layers (3km * 3km resolution) computed within the work package 3 of EU ATLAS project, and based on the EMODnet Digital Bathymetry portal and the General Bathymetric Chart of the Oceans (GEBCO). From these source layers, the mean depth (m), slope (degree) and BPI (no unit) were calculated for each 25km * 25km gridsquare. This dataset was built to feed a basin-wide spatial conservation planning exercise, targeting the deep sea of the North Atlantic. The goal of this approach was to identify conservation priority areas for Vulnerable Marine Ecosystems (VMEs) and deep fish species, based on the distribution of species and habitats, human activities and current spatial management.

Global wave hindcast (1961-2020) at 1° resolution using CMIP6 wind and sea-ice forcings for ALL (historical), GHG (historical greenhouse-gas-only), AER (historical Anthropogenic-aerosol-only), NAT (historical natural only) scenario.

Distribution of predicted suitable habitat for six cold-water-coral, six deep-water fish and one sponge species, on the North Atlantic (18°N to 76°N and 36°E to 98°W). For each species, predicted habitat distribution was obtained for present-day conditions (1951-2000) and for the future climate refugias, i.e. the areas that were predicted as suitable both for present-day and forecasted future (2081-2010) conditions. The dataset gathers 26 raster layers created on the same grid of 25km * 25km resolution, downgraded from source layers (3km *3km resolution) that were created within the work package 3 of EU ATLAS project. The presence (value=1) of climate refugia and the relative cover (value ranging from 0 to 1) of present-day suitable habitat was extracted in gridsquares. This dataset was built to feed a basin-wide spatial conservation planning exercise, targeting the deep sea of the North Atlantic. The goal of this approach was to identify conservation priority areas for Vulnerable Marine Ecosystems (VMEs) and deep fish species, based on the distribution of species and habitats, human activities and current spatial management.

In European sea bass like in other animals, the tongue plays a fundamental role in the mechanics of food ingestion. It is composed from the surface in depth of mucosa, submucosa, musculature and fibro cartilaginous skeleton. The tunica mucosa exhibits a stratified epithelium interrupted by numerous teeth differently distributed that erupt more or less completely from the layers below. The European sea bass tongue is composed of canine-like teeth, surrounded by taste buds and numerous fungiform and conical papillae. The tongue beeing directly in contact with external environment, the success of the adaptation of fishes to different environments in the context of global change, depends oamong other on the modifications occurring on the tongue structures. The present study investigates the potential effect of ocean acidification on the lingual transcriptome.