Sediment Profile Images (SPIs) are commonly used to map physical, biological and chemical/nutrient gradients in benthic habitats. SpiArcBase is a software that has been developed for the analysis of Sediment Profile Images (SPIs). It has been conceived to improve the objectivity of extracted information (especially the apparent Redox Potential Discontinuity (aRPD). The software presents a graphical user interface designed to enhance the interpretation of features observed on SPIs in an objective manner and to facilitate image management and structures visualization via a data base.The software also allows for the storage of generated data and the automatic computation of a benthic habitat quality index. The facilities provided within JERICONext include access to the software through free downloading and assistance in its utilization.

SpiArcBase is a software developed for the treatment of Sediment Profile images (SPIs). Sediment Profile Images (SPIs) are widely used for benthic ecological quality assessment under various environmental stressors. The processing of the information contained in SPIs is slow and its interpretation is largely operator dependent. SpiArcBase enhances the objectivity of the information extracted from SPIs, especially for the assessment of the apparent Redox Potential Discontinuity (aRPD). This software allows the user to create and manage a database containing original SPIs and corresponding derived pieces of information. Once you have downloaded it, you can ask for help and stablish a helpdesk.

A global Group for High Resolution Sea Surface Temperature (GHRSST) Level 2P dataset based on retrievals from the Visible Infrared Imaging Radiometer Suite (VIIRS). This sensor resides on the Suomi National Polar-orbiting Partnership (Suomi_NPP) satellite launched on 28 October 2011. VIIRS is a whiskbroom scanning radiometer which takes measurements in the cross-track direction within a field of regard of 112.56 degrees using 16 detectors and a double-sided mirror assembly. At a nominal altitude of 829 km, the swath width is 3060 km, providing full daily coverage both on the day and night side of the Earth.The VIIRS instrument is a 22-band, multi-spectral scanning radiometer that builds on the heritage of the MODIS , AVHRR and SeaWIFS sensors for sea surface temperature (SST) and ocean color. For the infrared bands for SST the effective pixel size is 750 meters at nadir and the pixel size variation across the swath is constrained to no more than 1600 meters at the edge of the swath. This L2P SST v3.0 is upgraded from the v2.0 with several significant improvements in processing algorithms, including contamination detection, cloud detection, and data format upgrades. It contains the global near daily-coverage Sea Surface Temperature at 1-meter depth with 750 m (along) x 750 m (cross) spatial resolution in swath coordinates. Each netCDF file has 768 x 3200 pixels in size, in compliance with the GHRSST Data Processing Specification (GDS) version 2 format specifications.

This L3U (Level 3 Uncollated) dataset contains global daily Sea Surface Temperature (SST) on a 0.02 degree grid resolution. It is produced by the National Oceanic and Atmospheric Administration (NOAA) Advanced Clear Sky Processor for Ocean (ACSPO) using L2P (Level 2 Preprocessed) product acquired from the Meteorological Operational satellite C (Metop-C) Advanced Very High Resolution Radiometer 3 (AVHRR/3) (https://podaac.jpl.nasa.gov/dataset/AVHRRF_MC-STAR-L2P-v2.80 ) in Full Resolution Area Coverage (FRAC) mode as input. It is distributed as 10-minute granules in netCDF-4 format, compliant with the Group for High Resolution Sea Surface Temperature (GHRSST) Data Specification version 2 (GDS2). There are 144 granules per 24-hour interval. Fill values are reported in all invalid pixels, including land pixels with >5 km inland. For each valid water pixel (defined as ocean, sea, lake or river), and up to 5 km inland, the following major layers are reported: SSTs and ACSPO clear-sky mask (ACSM; provided in each grid as part of l2p_flags, which also includes day/night, land, ice, twilight, and glint flags). Only input L2P SSTs with QL=5 were gridded, so all valid SSTs are recommended for the users. Per GDS2 specifications, two additional Sensor-Specific Error Statistics layers (SSES bias and standard deviation) are reported in each pixel with valid SST. Ancillary layers include wind speed and ACSPO minus reference Canadian Meteorological Centre (CMC) Level 4 (L4) SST. The ACSPO Metop-C AVHRR FRAC L3U product is monitored and validated against iQuam in situ data (Xu and Ignatov, 2014) in the NOAA SST Quality Monitor (SQUAM) system (Dash et al, 2010). SST imagery and clear-sky mask are evaluated, and checked for consistency with L2P and other satellites/sensors SST products, in the NOAA ACSPO Regional Monitor for SST (ARMS) system. More information about the dataset is found at AVHRRF_MC-STAR-L2P-v2.80 and in (Pryamitsyn et al., 2021).

A regional Group for High Resolution Sea Surface Temperature (GHRSST) Level 2P dataset based on multi-channel sea surface temperature (SST) retrievals generated in real-time from the Advanced Very High Resolution Radiometer (AVHRR) on the NOAA-18 platform (launched 20 May 2005) produced and used operationally in oceanographic analyses and forecasts by the US Naval Oceanographic Office (NAVO). The AVHRR is a space-borne scanning sensor on the National Oceanic and Atmospheric Administration (NOAA) family of Polar Orbiting Environmental Satellites (POES) having a operational legacy that traces back to the Television Infrared Observation Satellite-N (TIROS-N) launched in 1978. AVHRR instruments measure the radiance of the Earth in 5 (or 6) relatively wide spectral bands. The first two are centered around the red (0.6 micrometer) and near-infrared (0.9 micrometer) regions, the third one is located around 3.5 micrometer, and the last two sample the emitted thermal radiation, around 11 and 12 micrometers, respectively. The legacy 5 band instrument is known as AVHRR/2 while the more recent version, the AVHRR/3 (first carried on the NOAA-15 platform), acquires data in a 6th channel located at 1.6 micrometer. Typically the 11 and 12 micron channels are used to derive SST sometimes in combination with the 3.5 micron channel. The NOAA platforms are sun synchronous generally viewing the same earth location twice a day (latitude dependent) due to the relatively large AVHRR swath of approximately 2400 km. The highest ground resolution that can be obtained from the current AVHRR instruments is 1.1 km at nadir. AVHRR data are acquired in three formats: High Resolution Picture Transmission (HRPT), Local Area Coverage (LAC), and Global Area Coverage (GAC). HRPT data are full resolution image data transmitted to a ground stations as they are collected. LAC are also full resolution data, but the acquisition is prescheduled and recorded with an on-board tape recorder for subsequent transmission during a station overpass. GAC data provide daily subsampled global coverage recorded on tape recorders and then transmitted to a ground station. This particular dataset is derived from LAC data. Further binning and averaging of the 1.1 km LAC pixels results in a final dataset resolution of 2.2 km. The coverage of the LAC data can vary but generally contains scenes over the oceans adjacent to Australia and the North Indian Ocean.

A regional Group for High Resolution Sea Surface Temperature (GHRSST) Level 2P dataset based on multi-channel sea surface temperature (SST) retrievals generated in real-time from the Advanced Very High Resolution Radiometer (AVHRR) on the NOAA-19 platform (launched 6 Feb 2009) produced and used operationally in oceanographic analyses and forecasts by the US Naval Oceanographic Office (NAVO). The AVHRR is a space-borne scanning sensor on the National Oceanic and Atmospheric Administration (NOAA) family of Polar Orbiting Environmental Satellites (POES) having a operational legacy that traces back to the Television Infrared Observation Satellite-N (TIROS-N) launched in 1978. AVHRR instruments measure the radiance of the Earth in 5 (or 6) relatively wide spectral bands. The first two are centered around the red (0.6 micrometer) and near-infrared (0.9 micrometer) regions, the third one is located around 3.5 micrometer, and the last two sample the emitted thermal radiation, around 11 and 12 micrometers, respectively. The legacy 5 band instrument is known as AVHRR/2 while the more recent version, the AVHRR/3 (first carried on the NOAA-15 platform), acquires data in a 6th channel located at 1.6 micrometer. Typically the 11 and 12 micron channels are used to derive SST sometimes in combination with the 3.5 micron channel. The NOAA platforms are sun synchronous generally viewing the same earth location twice a day (latitude dependent) due to the relatively large AVHRR swath of approximately 2400 km. The highest ground resolution that can be obtained from the current AVHRR instruments is 1.1 km at nadir. AVHRR data are acquired in three formats: High Resolution Picture Transmission (HRPT), Local Area Coverage (LAC), and Global Area Coverage (GAC). HRPT data are full resolution image data transmitted to a ground stations as they are collected. LAC are also full resolution data, but the acquisition is prescheduled and recorded with an on-board tape recorder for subsequent transmission during a station overpass. GAC data provide daily subsampled global coverage recorded on tape recorders and then transmitted to a ground station. This particular dataset is derived from LAC data. Further binning and averaging of the 1.1 km LAC pixels results in a final dataset resolution of 2.2 km. The coverage of the LAC data can vary but generally contains scenes over the oceans adjacent to Australia and the North Indian Ocean.

A Group for High Resolution Sea Surface Temperature (GHRSST) Level 4 sea surface temperature analysis produced daily on an operational basis by the Danish Meteorological Institute (DMI) using an optimal interpolation (OI) approach on a global 0.05 degree grid. The analysis is based upon nighttime GHRSST L2P skin and subskin SST observations from several satellites. The sensors include the Advanced Very High Resolution Radiometer (AVHRR), the Spinning Enhanced Visible and Infrared Imager (SEVIRI), the Advanced Microwave Scanning Radiometer 2 (AMSR2), the Visible Infrared Imager Radiometer Suite (VIIRS), and the Moderate Resolution Imaging Spectroradiometer (MODIS) on Aqua. An ice field from the EUMETSAT OSI-SAF is used to mask out areas with ice. This dataset adheres to the version 2 GHRSST Data Processing Specification (GDS).

The Joint Polar Satellite System (JPSS), starting with S-NPP launched on 28 October 2011, is the new generation of the US Polar Operational Environmental Satellites (POES). The Suomi National Polar-orbiting Partnership (S-NPP) is a collaboration between NASA and NOAA. NOAA is responsible for all JPSS products, including SST from the Visible Infrared Imaging Radiometer Suite (VIIRS). VIIRS is a whiskbroom scanning radiometer, which takes measurements in the cross-track direction within a field of view of 112.56-deg using 16 detectors and a double-sided mirror assembly. At a nominal altitude of 829 km, the swath width is 3,060 km, providing global daily coverage for both day and night passes. VIIRS has 22 spectral bands covering the spectrum from 0.4-12 um, including 16 moderate resolution bands (M-bands). The L2P SST product is derived at the native sensor resolution (~0.75 km at nadir, ~1.5 km at swath edge) using NOAA's Advanced Clear-Sky Processor for Ocean (ACSPO) system, and reported in 10-minute granules in netCDF4 format, compliant with the GHRSST Data Specification version 2 (GDS2). There are 144 granules per 24hr interval, with a total data volume of 27GB/day. In addition to pixel-level earth locations, Sun-sensor geometry, and ancillary data from the NCEP global weather forecast, ACSPO outputs include four brightness temperatures (BTs) in M12 (3.7um), M14 (8.6um), M15 (11um), and M16 (12um) bands, and two reflectances in M5 (0.67um) and M7 (0.87um) bands. The reflectances are used for cloud identification. Beginning with ACSPO v2.60, all BTs and reflectances are destriped (Bouali and Ignatov, 2014) and resampled (Gladkova et al., 2016), to minimize the effect of bow-tie distortions and deletions. SSTs are retrieved from destriped BTs.SSTs are derived from BTs using the Multi-Channel SST (MCSST; night) and Non-Linear SST (NLSST; day) algorithms (Petrenko et al., 2014). An ACSPO clear-sky mask (ACSM) is provided in each pixel as part of variable l2p_flags, which also includes day/night, land, ice, twilight, and glint flags (Petrenko et al., 2010). Fill values are reported in all invalid pixels, including those with >5 km inland. For each valid water pixel (defined as ocean, sea, lake or river, and up to 5 km inland), four BTs in M12/14/15/16 (included for those users interested in direct "radiance assimilation", e.g., NOAA NCEP, NASA GMAO, ECMWF) and two refelctances in M5/7 are reported, along with derived SST. Other variables include NCEP wind speed and ACSPO SST minus reference SST (Canadian Met Centre 0.1deg L4 SST; available at https://podaac.jpl.nasa.gov/dataset/CMC0.1deg-CMC-L4-GLOB-v3.0). Only ACSM confidently clear pixels are recommended (equivalent to GDS2 quality level=5). Per GDS2 specifications, two additional Sensor-Specific Error Statistics layers (SSES bias and standard deviation) are reported in each pixel with QL=5. Note that users of ACSPO data have the flexibility to ignore the ACSM and derive their own clear-sky mask, and apply it to BTs and SSTs. They may also ignore ACSPO SSTs, and derive their own SSTs from the original BTs.The ACSPO VIIRS L2P product is monitored and validated against quality controlled in situ data provided by NOAA in situ SST Quality Monitor system (iQuam; Xu and Ignatov, 2014) using another NOAA system, SST Quality Monitor (SQUAM; Dash et al, 2010). Corresponding clear-sky BTs are validated against RTM simulations in the Monitoring IR Clear-sky Radiances over Ocean for SST system (MICROS; Liang and Ignatov, 2011). A reduced size (1GB/day), equal-angle gridded (0.02-deg resolution), ACSPO L3U product is also available at https://podaac.jpl.nasa.gov/dataset/VIIRS_NPP-OSPO-L3U-v2.61, where gridded L2P SSTs with QL=5 only are reported, and BT layers omitted.

These files contain NASA produced skin sea surface temperature (SST) products from the Infrared (IR) channels of the Visible and Infrared Imager/Radiometer Suite (VIIRS) onboard the Suomi-NPP satellite. VIIRS is a multi-disciplinary instrument that is also being flown on the Joint Polar Satellite System (JPSS) series of spacecraft, of which NOAA-20 is the first. JPSS is a multi-agency program that consolidates the polar orbiting spacecraft of NASA and the National Oceanic and Atmospheric Administration (NOAA). Suomi-NPP is the initial spacecraft in this series, and VIIRS is the successor to MODIS for Earth science data. VIIRS has 22 spectral bands ranging from 412 nm to 12 micron . There are 16 moderate-resolution bands (750m at nadir), 5 image-resolution bands (375 m), and one day-night band (DNB). VIIRS uses on-board pixel aggregation to reduce the growth in size of pixels away from nadir. Two SST products are contained in these files. The first is a skin SST produced separately for day and night observations, derived from the long wave IR 11 and 12 micron wavelength channels, using a modified nonlinear SST algorithm intended to provide continuity of SST products from heritage and current NASA sensors. At night, a second triple channel SST product is generated using the 3.7 , 11 and 12 micron IR channels, identified as SST_triple. Due to the sun glint in the 3.7 micron SST_triple can only be used at night. VIIRS L2P SST data have a 750 spatial resolution at nadir and are stored in ~288 five minute granules per day. Full global coverage is obtained each day. The production of VIIRS NASA L2P SST files is part of the Group for High Resolution Sea Surface Temperature (GHRSST) project and is a joint collaboration between the NASA Jet Propulsion Laboratory (JPL), the NASA Ocean Biology Processing Group (OBPG), and the Rosenstiel School of Marine and Atmospheric Science (RSMAS). Researchers at RSMAS were responsible for sea surface temperature algorithm development, error statistics and quality flagging, while the OBPG, as the NASA ground data system, is responsible for the production of VIIRS ocean products. JPL acquires VIIRS ocean granules from the OBPG and reformats them to the GHRSST L2P netCDF specification with complete metadata and is the official Physical Oceanography Data Archive (PO.DAAC) for SST. In mid-August, 2018, the RSMAS involvement in the VIIRS SST project ceased, and the subsequent fields are not maintained.The R2016.2 supersedes the previous v2016.0 datasets which can be found at https://doi.org/10.5067/GHVRS-2PN16

A Group for High Resolution Sea Surface Temperature (GHRSST) Level 4 sea surface temperature analysis produced daily on an operational basis at the Naval Oceanographic Office (NAVOCEANO) on a global 0.1 degree grid. The K10 L4 sea surface temperature analysis uses SST observations from the Advanced Very High Resolution Radiometer (AVHRR), the Advanced Microwave Scanning Radiometer for EOS (AMSR-E), and the Geostationary Operational Environmental Satellite (GOES) Imager. The age, reliability, and resolution of the data are used in the weighted average with the analysis tuned to represent SST at 1 meter depth. AVHRR Pathfinder 9km climatology is used when no new satellite SST retrievals are available after 34 days.