SpiArcBase is a software developed for the treatment of Sediment Profile images (SPIs). Sediment Profile Images (SPIs) are widely used for benthic ecological quality assessment under various environmental stressors. The processing of the information contained in SPIs is slow and its interpretation is largely operator dependent. SpiArcBase enhances the objectivity of the information extracted from SPIs, especially for the assessment of the apparent Redox Potential Discontinuity (aRPD). This software allows the user to create and manage a database containing original SPIs and corresponding derived pieces of information. Once you have downloaded it, you can ask for help and stablish a helpdesk.

Sediment Profile Images (SPIs) are commonly used to map physical, biological and chemical/nutrient gradients in benthic habitats. SpiArcBase is a software that has been developed for the analysis of Sediment Profile Images (SPIs). It has been conceived to improve the objectivity of extracted information (especially the apparent Redox Potential Discontinuity (aRPD). The software presents a graphical user interface designed to enhance the interpretation of features observed on SPIs in an objective manner and to facilitate image management and structures visualization via a data base.The software also allows for the storage of generated data and the automatic computation of a benthic habitat quality index. The facilities provided within JERICONext include access to the software through free downloading and assistance in its utilization.

These files contain NASA produced skin sea surface temperature (SST) products from the Infrared (IR) channels of the Visible and Infrared Imager/Radiometer Suite (VIIRS) onboard the Suomi-NPP satellite. VIIRS is a multi-disciplinary instrument that is also being flown on the Joint Polar Satellite System (JPSS) series of spacecraft, of which NOAA-20 is the first. JPSS is a multi-agency program that consolidates the polar orbiting spacecraft of NASA and the National Oceanic and Atmospheric Administration (NOAA). Suomi-NPP is the initial spacecraft in this series, and VIIRS is the successor to MODIS for Earth science data. VIIRS has 22 spectral bands ranging from 412 nm to 12 micron . There are 16 moderate-resolution bands (750m at nadir), 5 image-resolution bands (375 m), and one day-night band (DNB). VIIRS uses on-board pixel aggregation to reduce the growth in size of pixels away from nadir. Two SST products are contained in these files. The first is a skin SST produced separately for day and night observations, derived from the long wave IR 11 and 12 micron wavelength channels, using a modified nonlinear SST algorithm intended to provide continuity of SST products from heritage and current NASA sensors. At night, a second triple channel SST product is generated using the 3.7 , 11 and 12 micron IR channels, identified as SST_triple. Due to the sun glint in the 3.7 micron SST_triple can only be used at night. VIIRS L2P SST data have a 750 spatial resolution at nadir and are stored in ~288 five minute granules per day. Full global coverage is obtained each day. The production of VIIRS NASA L2P SST files is part of the Group for High Resolution Sea Surface Temperature (GHRSST) project and is a joint collaboration between the NASA Jet Propulsion Laboratory (JPL), the NASA Ocean Biology Processing Group (OBPG), and the Rosenstiel School of Marine and Atmospheric Science (RSMAS). Researchers at RSMAS were responsible for sea surface temperature algorithm development, error statistics and quality flagging, while the OBPG, as the NASA ground data system, is responsible for the production of VIIRS ocean products. JPL acquires VIIRS ocean granules from the OBPG and reformats them to the GHRSST L2P netCDF specification with complete metadata and is the official Physical Oceanography Data Archive (PO.DAAC) for SST. In mid-August, 2018, the RSMAS involvement in the VIIRS SST project ceased, and the subsequent fields are not maintained.The R2016.2 supersedes the previous v2016.0 datasets which can be found at https://doi.org/10.5067/GHVRS-2PN16

A global Group for High Resolution Sea Surface Temperature (GHRSST) Level 2P data set containing multi-channel Sea Surface Temperature (SST) retrievals derived in real-time from the Advanced Very High Resolution Radiometer (AVHRR) level-1B data from the Meteorological Operational-A (MetOp-A) satellite. The SST data in this data set are used operationally in oceanographic analyses and forecasts by the US Naval Oceanographic Office (NAVO). The MetOp satellite program is a European multi-satellite program to provide weather data services for monitoring climate and improving weather forecasts. MetOp-A, MetOp-B and Metop-C were respectively launched on 19 Oct 2006, 17 September 2012 and 7 November 2018. The program was jointly established by the European Space Agency (ESA) and the European Organization for the Exploitation of Meteorological Satellites (EUMETSAT) with the US National Oceanic and Atmospheric Administration (NOAA) contributing the AVHRR sensor. AVHRR instruments measure the radiance of the Earth in 5 (or 6) relatively wide spectral bands. The first two are centered around the red (0.6 micron) and near-infrared (0.9 micron) regions, the third one is located around 4 (3.6) micron, and the last two sample the emitted thermal radiation, around 11 and 12 micron, respectively. The legacy 5 band instrument is known as AVHRR/2 while the more recent version, the AVHRR/3 (first carried on the NOAA-15 platform), acquires data in a 6th channel located at 1.6 micron. Typically, the 11 and 12 micron channels are used to derive SST sometimes in combination with the 3.5 micron channel. The swath of the AVHRR sensor is a relatively large 2400 km. All MetOp platforms are sun synchronous and generally view the same earth location twice a day (latitude dependent). The ground native resolution of the AVHRR instruments is approximately 1.1 km at nadir and degrades off nadir. This particular data set is produced from legacy Global Area Coverage (GAC) data that are derived from a sample averaging of the full resolution global AVHRR data. Four out of every five samples along the scan line are used to compute on average value and the data from only every third scan line are processed, yielding an effective 4 km spatial resolution at nadir. The v2.0 is the updated version from current v1.0 with extensive algorithm improvements and upgrades. The major improvements include: 1) Significant changes in contaminant/cloud detection; 2) Increased the spatial resolution from 9 km to 4 km; 3) Updated compliance with GDS2, ACDD 1.3, and CF 1.6; and 4) Removed the dependency on the High-resolution Infrared Radiation Sounder (HIRS) sensor (only available to MetOp-A/B), thus allowing for the consistent inter-calibration and the processing of MetOp-A/B/C data Version Description:

A Group for High Resolution Sea Surface Temperature (GHRSST) dataset for the Eastern Atlantic Region from the Spinning Enhanced Visible and InfraRed Imager (SEVIRI) on the Meteosat Second Generation (MSG-3) satellites (launched 5 July 2012). The European Organization for the Exploitation of Meteorological Satellites (EUMETSAT), Ocean and Sea Ice Satellite Application Facility (OSI SAF) is producing SST products in near real time from MSG/SEVIRI. SEVIRI level 1.5 data are acquired at Meteo-France/Centre de Meteorologie Spatiale (CMS) through the EUMETSAT/EUMETCAST system. SST is retrieved from the SEVIRI infrared channels (10.8 and 12.0 micrometer) using a multispectral algorithm. Atmospheric profiles of water vapor and temperature from a numerical weather prediction model, together with a radiatiave transfer model, are used to correct the multispectral algorithm for regional and seasonal biases due to changing atmospheric conditions. Every 15 minutes slot is processed at full satellite resolution. The operational products are then produced by remapping over a 0.05 degree regular grid (60S-60N and 60W-60E) SST fields obtained by aggregating all 15 minute SST data available in one hour time, and the priority being given to the value the closest in time to the product nominal hour. The product format is compliant with the GHRSST Data Specification (GDS) version 2. Version Description:

NOAA-20 (hereafter, N20; also known as JPSS-1 or J1 prior to launch) is the second satellite in the US National Oceanic and Atmospheric Administration (NOAA) latest generation Joint Polar Satellite System (JPSS). N20 was launched on November 18, 2017. In conjunction with the first US satellite in JPSS series, Suomi National Polar-orbiting Partnership (S-NPP) satellite launched on October 28, 2011, N20 form the new NOAA polar constellation. The ACSPO N20/VIIRS L3U (Level 3 Uncollated) product is a gridded version of the ACSPO N20/VIIRS L2P product available here https://podaac.jpl.nasa.gov/dataset/VIIRS_N20-OSPO-L2P-v2.61. The L3U output files are 10-minute granules in netCDF4 format, compliant with the GHRSST Data Specification version 2 (GDS2). There are 144 granules per 24hr interval, with a total data volume of 500MB/day. Fill values are reported at all invalid pixels, including pixels with >5 km inland. For each valid water pixel (defined as ocean, sea, lake or river, and up to 5 km inland), the following layers are reported: SSTs, ACSPO clear-sky mask (ACSM; provided in each grid as part of l2p_flags, which also includes day/night, land, ice, twilight, and glint flags), NCEP wind speed, and ACSPO SST minus reference (Canadian Met Centre 0.1deg L4 SST; available at https://podaac.jpl.nasa.gov/dataset/CMC0.1deg-CMC-L4-GLOB-v3.0 ). Only L2P SSTs with QL=5 were gridded, so all valid SSTs are recommended for the users. Per GDS2 specifications, two additional Sensor-Specific Error Statistics layers (SSES bias and standard deviation) are reported in each pixel with valid SST. The ACSPO VIIRS L3U product is monitored and validated against iQuam in situ data (Xu and Ignatov, 2014) in SQUAM (Dash et al, 2010).

A Group for High Resolution Sea Surface Temperature (GHRSST) global Level 4 sea surface temperature analysis produced daily on a 0.25 degree grid at the NOAA National Climatic Data Center. This product uses optimal interpolation (OI) using data from the Advanced Very High Resolution Radiometer (AVHRR) Pathfinder Version 5 time series (when available, otherwise operational NOAA AVHRR data are used), the Advanced Microwave Scanning Radiometer-EOS (AMSR-E), and in situ ship and buoy observations. A second similar product is available back to 1981 that includes only in situ and AVHRR Pathfinder data in its analysis. The OI analysis is a daily average SST that is bias adjusted using a spatially smoothed 7-day in situ SST average and is thus tuned to about 0.3 meter. Both day and night satellite fields are independently bias adjusted. More information is available at http://www.ncdc.noaa.gov/oa/climate/research/sst/oi-daily.php

A Group for High Resolution Sea Surface Temperature (GHRSST) Level 4 sea surface temperature analysis produced daily on an operational basis at the Office of Satellite and Product Operations (OSPO) using optimal interpolation (OI) on a global 0.054 degree grid. The Geo-Polar Blended Sea Surface Temperature (SST) Analysis combines multi-satellite retrievals of sea surface temperature into a single analysis of SST. This analysis includes only nighttime data from sensors that include the Advanced Very High Resolution Radiometer (AVHRR), the Visible Infrared Imager Radiometer Suite (VIIRS), the Geostationary Operational Environmental Satellite (GOES) imager, the Japanese Advanced Meteorological Imager (JAMI) and in situ data from ships, drifting and moored buoys. This analysis was specifically produced to be used as a lower boundary condition in Numerical Weather Prediction (NWP) models. This dataset adheres to the GHRSST Data Processing Specification (GDS) version 2 format specifications.

NOAA-20 (N20/JPSS-1/J1) is the second satellite in the US NOAA latest generation Joint Polar Satellite System (JPSS). N20 was launched on November 18, 2017. In conjunction with the first US satellite in JPSS series, Suomi National Polar-orbiting Partnership (S-NPP) satellite launched on October 28, 2011, N20 form the new NOAA polar constellation. NOAA is responsible for all JPSS products, including SST from the Visible Infrared Imaging Radiometer Suite (VIIRS). VIIRS is a whiskbroom scanning radiometer, which takes measurements in the cross-track direction within a field of view of 112.56-deg using 16 detectors and a double-sided mirror assembly. At a nominal altitude of 829 km, the swath width is 3,060 km, providing global daily coverage for both day and night passes. VIIRS has 22 spectral bands, covering the spectrum from 0.4-12 um, including 16 moderate resolution bands (M-bands). The L2P SST product is derived at the native sensor resolution (~0.75 km at nadir, ~1.5 km at swath edge) using NOAA's Advanced Clear-Sky Processor for Ocean (ACSPO) system, and reported in 10 minute granules in netCDF4 format, compliant with the GHRSST Data Specification version 2 (GDS2). There are 144 granules per 24hr interval, with a total data volume of 27GB/day. In addition to pixel-level earth locations, Sun-sensor geometry, and ancillary data from the NCEP global weather forecast, ACSPO outputs include four brightness temperatures (BTs) in M12 (3.7um), M14 (8.6um), M15 (11um), and M16 (12um) bands, and two reflectances in M5 (0.67um) and M7 (0.87um) bands. The reflectances are used for cloud identification. Beginning with ACSPO v2.60, all BTs and reflectances are destriped (Bouali and Ignatov, 2014) and resampled (Gladkova et al., 2016), to minimize the effect of bow-tie distortions and deletions. SSTs are retrieved from destriped BTs. SSTs are derived from BTs using the Multi-Channel SST (MCSST; night) and Non-Linear SST (NLSST; day) algorithms (Petrenko et al., 2014). ACSPO clear-sky mask (ACSM) is provided in each pixel as part of variable l2p_flags, which also includes day/night, land, ice, twilight, and glint flags (Petrenko et al., 2010). Fill values are reported in all pixels with >5 km inland. For each valid water pixel (defined as ocean, sea, lake or river, and up to 5 km inland), four BTs in M12/14/15/16 (included for those users interested in direct "radiance assimilation", e.g., NOAA NCEP, NASA GMAO, ECMWF) and two refelctances in M5/7 are reported, along with derived SST. Other variables include NCEP wind speed and ACSPO SST minus reference SST (Canadian Met Centre 0.1deg L4 SST; available at https://podaac.jpl.nasa.gov/dataset/CMC0.1deg-CMC-L4-GLOB-v3.0). Only ACSM confidently clear pixels are recommended (equivalent to GDS2 quality level=5). Per GDS2 specifications, two additional Sensor-Specific Error Statistics layers (SSES bias and standard deviation) are reported in each pixel with QL=5. Note that users of ACSPO data have the flexibility to ignore the ACSM and derive their own clear-sky mask, and apply it to BTs and SSTs. They may also ignore ACSPO SSTs, and derive their own SSTs from the original BTs. The L2P product is monitored and validated against quality controlled in situ data provided by NOAA in situ SST Quality Monitor system (iQuam; Xu and Ignatov, 2014), using another NOAA system, SST Quality Monitor (SQUAM; Dash et al, 2010). Corresponding clear-sky BTs are validated against RTM simulation in the Monitoring IR Clear-sky Radiances over Ocean for SST system (MICROS; Liang and Ignatov, 2011). A reduced size (1GB/day), equal-angle gridded (0.02-deg), ACSPO L3U product is also available at https://podaac.jpl.nasa.gov/dataset/VIIRS_N20-OSPO-L3U-v2.61, where gridded L2P SSTs with QL=5 only are reported, and BT layers omitted.

A global Group for High Resolution Sea Surface Temperature (GHRSST) Level 2P dataset based on multi-channel sea surface temperature (SST) retrievals generated in real-time from the Advanced Very High Resolution Radiometer (AVHRR) on the NOAA-18 platform (launched 20 May 2005) produced and used operationally in oceanographic analyses and forecasts by the US Naval Oceanographic Office (NAVO). The AVHRR is a space-borne scanning sensor on the National Oceanic and Atmospheric Administration (NOAA) family of Polar Orbiting Environmental Satellites (POES) having a operational legacy that traces back to the Television Infrared Observation Satellite-N (TIROS-N) launched in 1978. AVHRR instruments measure the radiance of the Earth in 5 (or 6) relatively wide spectral bands. The first two are centered around the red (0.6 micrometer) and near-infrared (0.9 micrometer) regions, the third one is located around 3.5 micrometer, and the last two sample the emitted thermal radiation, around 11 and 12 micrometers, respectively. The legacy 5 band instrument is known as AVHRR/2 while the more recent version, the AVHRR/3 (first carried on the NOAA-15 platform), acquires data in a 6th channel located at 1.6 micrometer. Typically the 11 and 12 micron channels are used to derive SST sometimes in combination with the 3.5 micron channel. The NOAA platforms are sun synchronous generally viewing the same earth location twice a day (latitude dependent) due to the relatively large AVHRR swath of approximately 2400 km. The highest ground resolution that can be obtained from the current AVHRR instruments is 1.1 km at nadir. AVHRR data are acquired in three formats: High Resolution Picture Transmission (HRPT), Local Area Coverage (LAC), and Global Area Coverage (GAC). HRPT data are full resolution image data transmitted to a ground stations as they are collected. LAC are also full resolution data, but the acquisition is prescheduled and recorded with an on-board tape recorder for subsequent transmission during a station overpass. This particular dataset is produced from GAC data that are derived from an on-board sample averaging of the full resolution global AVHRR data. Four out of every five samples along the scan line are used to compute on average value and the data from only every third scan line are processed, yielding an effective 4 km resolution at nadir. Further binning and averaging of these pixels results in a final dataset resolution of 8.8 km.