biota
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Modelled density of the seapen Kophobelemnon stelliferum in the North East Atlantic. The Random Forest density model trained on data collected by an ROV was constrained by an ensemble of Maxent and Random Forest presence-absence model trained on a larger dataset also collected by an ROV. This species provides structural complexity in an environment where it is lacking and, thus, promotes higher biodiversity where they settle. They are vulnerable to mechanical disturbance of the sediment by fishing gear and a better understanding of their distribution will lead to better management of their population. This work was performed at the University of Plymouth in 2021.
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This metadata corresponds to the EUNIS Littoral biogenic habitat types (salt marshes), distribution based on vegetation plot data dataset. Littoral biogenic habitats (commonly known as salt marshes) are formed by animals such as worms and mussels or plants. The verified saltmarsh habitat samples used are derived from the Braun-Blanquet database (http://www.sci.muni.cz/botany/vegsci/braun_blanquet.php?lang=en) which is a centralised database of vegetation plots and comprises copies of national and regional databases using a unified taxonomic reference database. The geographic extent of the distribution data are all European countries except Armenia and Azerbaijan. The dataset is provided both in Geodatabase and Geopackage formats.
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The dataset includes age- and length-based catch per unit effort data for commercial fish species collected by the French trawl survey EVHOE.
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Maps of potential biomass catches (tons/year) per surface unit (0.25º latitude x 0.25º longitude) based on 3-D probability of occurrence for the main commercial fish species of the Atlantic. To map potential catches, first, mean catches (tons/year) were calculated according to Watson (2020) Global fisheries landings (V4) database for period 2010-2015 and then the total mean catch value for each species was redistributed according to the occurrence probability value that was modelled in 3-D using Shape-Constrained Generalized Additive Models (SC-GAMs). Potential catch value of each cell integrates the catches along the water column (from surface until 1000 m depth). See Valle et al. (2024) in Ecological Modelling 490:110632 ( https://doi.org/10.1016/j.ecolmodel.2024.110632 ), for more details.
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Species distribution models (GAM, Maxent and Random Forest ensemble) predicting the distribution of Solenosmilia variabilis reef assemblage in the Celtic Sea. This community is considered ecologically coherent according to the cluster analysis conducted by Parry et al. (2015) on image sample. Modelling its distribution complements existing work on their definition and offers a representation of the extent of the areas of the North East Atlantic where they can occur based on the best available knowledge. This work was performed at the University of Plymouth in 2021.
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ICES database of trawl surveys
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This metadata corresponds to the EUNIS Littoral biogenic habitat (salt marshes) types, predicted distribution of habitat suitability dataset. Littoral habitats are those formed by animals such as worms and mussels or plants (salt marshes). The verified littoral biogenic habitat samples used are derived from the Braun-Blanquet database (http://www.sci.muni.cz/botany/vegsci/braun_blanquet.php?lang=en) which is a centralised database of vegetation plots and comprises copies of national and regional databases using a unified taxonomic reference database. The geographic extent of the distribution data are all European countries except Armenia and Azerbaijan. The modelled suitability for EUNIS saltmarsh habitat types is an indication of where conditions are favourable for the habitat type based on sample plot data (Braun-Blanquet database) and the Maxent software package. The modelled suitability map may be used as a proxy for the geographical distribution of the habitat type. However, note that it is not representing the actual distribution of the habitat type. As predictors for the suitabilty modelling not only Climate and Soil parameters have been taken into account, but also so-called RS-EVB's, Remote Sensing-enabled Essential Biodiversity Variables like Landuse, Vegetation height, Phenology, LAI(Leave Area Index) and Population density. Because the EBV's are restricted by the extent of the Remote Sensing data (EEA38 countries and the United Kingdom) the modelling result does also not go beyond this boundary. The dataset is provided both in Geodatabase and Geopackage formats. The Training map files show the modelled suitable distribution, omitting the 10% of occurrence records in the least suitable environment under the assumption that they are not representative of the overall suitable habitat distribution. The 10 percentile training presence is an arbitrary threshold which omits all regions with habitat suitability lower than the suitability values for the lowest 10% of occurrence records.
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Species distribution models (GAM, Maxent and Random Forest ensemble) predicting the distribution of Acanella arbuscula assemblage in the Celtic Sea. This community is considered ecologically coherent according to the cluster analysis conducted by Parry et al. (2015) on image sample. Modelling its distribution complements existing work on their definition and offers a representation of the extent of the areas of the North East Atlantic where they can occur based on the best available knowledge. This work was performed at the University of Plymouth in 2021.
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Species distribution models (Maxent) predicting the distribution of two Vulnerable Marine Ecosystems (VME): the reef-forming Scleractinian coral Desmophyllum pertusum and the aggregations forming Hexactinellid sponge Pheronema carpenteri. Both of these species are VME indicator taxa and form habitat that enhance deep-sea diversity (Ross and Howell, 2013). Maps of the likely distribution of the habitat formed by these two species will enable efficient Marine Spatial planning to facilitate their conservation. This work was performed at the University of Plymouth in 2021. A GIS layer is provided for each species.
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Species distribution models (Random Forest) predicting the distribution of mixed cold-water coral community (Coral Garden) assemblage in the Celtic Sea. This community is considered ecologically coherent according to the cluster analysis conducted by Parry et al. (2015) on image sample. Modelling its distribution complements existing work on their definition and offers a representation of the extent of the areas of the North East Atlantic where they can occur based on the best available knowledge. This work was performed at the University of Plymouth in 2021.